Query= MSMg01no120_a22.b1 MSMg01no120_a22.b1 CHROMAT_FILE:
MSMg01no120_a22.b1 PHD_FILE: MSMg01no120_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:23 2005
(207 letters)
>mm_chr13_39183284_39183890
Length = 607
Score = 356 bits (184), Expect = e-103
Identities = 196/200 (98%), Gaps = 2/200 (1%)
Strand = Plus / Minus
Query: 9 ccca-agtggccttagtcacagcaacctgcccccctcagcctctcaaatacgtgggcata 67
|||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 407 cccacagtggccttagtcacagcaacctg-ccccctcagcctctcaaatacgtgggcata 349
Query: 68 tactaccagacttggcaaggagttgttattattcaagtgtatagtgaaagtgggaatcca 127
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 348 tactaccagacttggcaaggagttgtaattattcaagtgtatagtgaaagtgggaatcca 289
Query: 128 aggtgctgagatgacaatgtactcaggaagagctgggaaaattctgtggactatgaataa 187
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 288 aggtgctgagatgacaatgtagtcaggaagagctgggaaaattctgtggactatgaataa 229
Query: 188 gccgagcatgaagggtcgtc 207
||||||||||||||||||||
Sbjct: 228 gccgagcatgaagggtcgtc 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 207
Length of database: 607
Length adjustment: 9
Effective length of query: 198
Effective length of database: 598
Effective search space: 118404
Effective search space used: 118404
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no120_a22.g1 MSMg01no120_a22.g1 CHROMAT_FILE:
MSMg01no120_a22.g1 PHD_FILE: MSMg01no120_a22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:23 2005
(185 letters)
>mm_chr13_39035489_39036074
Length = 586
Score = 306 bits (158), Expect = 7e-88
Identities = 179/186 (96%), Gaps = 1/186 (0%)
Strand = Plus / Plus
Query: 1 attcactc-ttttcctttgcctctatttacaaagtgacatgtattctaacctttggtaaa 59
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcactcattttcctttgcctctatttacaaagtgacatgtattctaacctttggtaaa 260
Query: 60 gattctaaggtaatgtatgtgcctagccataagttttattatagactgaggtatttgttc 119
|||||||||||||||||||||||||| || |||||||| || ||||||||||||||||||
Sbjct: 261 gattctaaggtaatgtatgtgcctagtcagaagttttagtagagactgaggtatttgttc 320
Query: 120 catatgaacaaaccactatctttggtgtccagggaggtggctggtacatttccactgtaa 179
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 catatgaacaaaccactatctttaatgtccagggaggtggctggtacatttccactgtaa 380
Query: 180 aaggtg 185
||||||
Sbjct: 381 aaggtg 386
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 185
Length of database: 586
Length adjustment: 8
Effective length of query: 177
Effective length of database: 578
Effective search space: 102306
Effective search space used: 102306
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
