Query= MSMg01no120_i18.b1 MSMg01no120_i18.b1 CHROMAT_FILE:
MSMg01no120_i18.b1 PHD_FILE: MSMg01no120_i18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:01 2005
(212 letters)
>mm_chr13_51826670_51827279
Length = 610
Score = 375 bits (194), Expect = e-109
Identities = 207/212 (97%), Gaps = 2/212 (0%)
Strand = Plus / Plus
Query: 1 tgtccctggagagtcccagaaggtgtccaggagctccggagtggctgcctgacacaaagc 60
||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtccctggagagtcccaggaggggtccaggagctccggagtggctgcctgacacaaagc 260
Query: 61 tgttgtcccagctctggtgttcccaggcctcagagagtatccccagagccaagatttcca 120
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 tgttgtcccagctctggtgttcccaggcctcagag--tatccccagagccaagatttcca 318
Query: 121 gttggcagggacgtgccctactgtagttacattggcaaagcccagctagctagcaggagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gttggcagggacgtgccctactgtagttacattggcaaagcccagctagctagcaggagc 378
Query: 181 agctggacatctccatctaagtcagcattcaa 212
||||||||||||||||||| ||||||||||||
Sbjct: 379 agctggacatctccatctaggtcagcattcaa 410
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 212
Length of database: 610
Length adjustment: 9
Effective length of query: 203
Effective length of database: 601
Effective search space: 122003
Effective search space used: 122003
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no120_i18.g1 MSMg01no120_i18.g1 CHROMAT_FILE:
MSMg01no120_i18.g1 PHD_FILE: MSMg01no120_i18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:01 2005
(180 letters)
>mm_chr13_51880276_51880855
Length = 580
Score = 333 bits (172), Expect = 5e-96
Identities = 178/180 (98%)
Strand = Plus / Minus
Query: 1 catgctttcttgggcctgtttgaagtcagatcctagcctagcgctggctgccagggctgg 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 380 catgctttcttgggcctgtttgaagtcagatcctagcctagcactggctgccagggctgg 321
Query: 61 ttttctgttcttacagaggtttccagggtgtcaggtgaacacggctggcagttgtggcac 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 320 ttttctgttcttacagaggtttccagggtgtcaggtgaacacgtctggcagttgtggcac 261
Query: 121 ggagtctggcgcctgccactcctacacttaccttagcagtgactgaggtgatcgggtcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ggagtctggcgcctgccactcctacacttaccttagcagtgactgaggtgatcgggtcca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 180
Length of database: 580
Length adjustment: 8
Effective length of query: 172
Effective length of database: 572
Effective search space: 98384
Effective search space used: 98384
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
