Query= MSMg01no121_g06.b1 MSMg01no121_g06.b1 CHROMAT_FILE:
MSMg01no121_g06.b1 PHD_FILE: MSMg01no121_g06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:29:09 2005
(294 letters)
>mm_chr13_46715509_46716202
Length = 694
Score = 549 bits (284), Expect = e-161
Identities = 290/292 (99%)
Strand = Plus / Plus
Query: 1 gattaagaggctgagcttgaacacactctggtgtggaacttgtagacacatccccgcttt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 gattaagaggctgagcttgaacacactctggtgtggaacttgtagacacatccctgcttt 260
Query: 61 tttgtgcagttgtgcttactatagcttcagaaagtgactgcggctatctgtaaagtagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgtgcagttgtgcttactatagcttcagaaagtgactgcggctatctgtaaagtagaa 320
Query: 121 gctccaaggctctgggtgggcggatgtgggggactgccatgcactctccacgcagcctgg 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctccaaggctctgggtgggcagatgtgggggactgccatgcactctccacgcagcctgg 380
Query: 181 gtgggcgtctggctgtgggaagccactgaagtccagtctgcagggaggcggggggagcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgggcgtctggctgtgggaagccactgaagtccagtctgcagggaggcggggggagcag 440
Query: 241 tccagggtccctgggcctcacgaaggccagggatgacaggttccagcacttg 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tccagggtccctgggcctcacgaaggccagggatgacaggttccagcacttg 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no121_g06.g1 MSMg01no121_g06.g1 CHROMAT_FILE:
MSMg01no121_g06.g1 PHD_FILE: MSMg01no121_g06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:29:09 2005
(523 letters)
>mm_chr13_46789803_46790725
Length = 923
Score = 965 bits (499), Expect = 0.0
Identities = 505/507 (99%), Gaps = 1/507 (0%)
Strand = Plus / Minus
Query: 1 tttgatttattattatttcttattttttgaataaaggttctaactgtcaccctggctggc 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 870 tttgatttattattatttcttattttttgaataaaggttctaactgtaaccctggctggc 811
Query: 61 ctggaagctcagtgttatgttaattaagcagttcttaaacaatggtctgcctgttttgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 ctggaagctcagtgttatgttaattaagcagttcttaaacaatggtctgcctgttttgcc 751
Query: 121 tcctgagtgttaggattaaaggagtgccctcctatgcctagctggaaaatatattgacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 tcctgagtgttaggattaaaggagtgccctcctatgcctagctggaaaatatattgacaa 691
Query: 181 caccagaaagactataccagtttcttttctgtggtactaaaggctggagaaccagattcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 caccagaaagactataccagtttcttttctgtggtactaaaggctggagaaccagattcc 631
Query: 241 tgatggtgttggtgtatattatatggaatgtagcttgtttcaaataaagacgtttcctag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 tgatggtgttggtgtatattatatggaatgtagcttgtttcaaataaagacgtttcctag 571
Query: 301 gcattgagtcagtagtacattgagtttaattagactccctacttccacaccatagttcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gcattgagtcagtagtacattgagtttaattagactccctacttccacaccatagttcca 511
Query: 361 tgtgaatatttttgttaaaataaaccttcagtttttacaaaattcgagaagtactccaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tgtgaatatttttgttaaaataaaccttcagtttttacaaaattcgagaagtactccaaa 451
Query: 421 gtgtggtattgatgacagatgtatttgacttgggtttttgtcactaaaattcctcctttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 gtgtggtattgatgacagatgtatttgacttgggtttttgtcactaaaattcctcctttg 391
Query: 481 tgaggacagacagggtcttt-tttttt 506
|||||||||||||||||||| ||||||
Sbjct: 390 tgaggacagacagggtctttatttttt 364
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space: 468369
Effective search space used: 468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
