Query= MSMg01no122_a07.b1 MSMg01no122_a07.b1 CHROMAT_FILE:
MSMg01no122_a07.b1 PHD_FILE: MSMg01no122_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:30:00 2005
(674 letters)
>mm_chr13_3495792_3496865
Length = 1074
Score = 1197 bits (619), Expect = 0.0
Identities = 637/643 (99%)
Strand = Plus / Minus
Query: 1 ctctctgataccaactctctgtttttatctctctccctgcctctctctggttcccattga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 ctctctgataccaactctctgtttttatctctctccctgcctctctctggttcccattga 584
Query: 61 ctttaataaggatttcttgcatgagcatggagtggaaattatttactgtgcatgtactgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 ctttaataaggatttcttgcatgagcatggagtggaaattatttactgtgcatgtactgc 524
Query: 121 ttatcagggtctatgctactcatgaaaatgatatctgacatcccttcacaagtctcatgg 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 523 ttatcagggtctatgctactcatgaaaatgatatctgatatcccttcacaagtctcatgg 464
Query: 181 tttcaatagtaagcaaactgaccagatagaaatgaggacggtaccctgtggcttactttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tttcaatagtaagcaaactgaccagatagaaatgaggacggtaccctgtggcttactttc 404
Query: 241 agatagagtggattgatttcaactaggcattctatcatggggaactgtgatgagtctgtt 300
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 403 agatagagtggattgatttcaactaggcattcgaccatggggaactgtgatgagtctgtt 344
Query: 301 aaaattccttcatgtcctcataatcagcttggcatccttgctgccagctggcctggtatg 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 343 aaaattccttcatgtcctcataatcagcttggcatccttgctgccagctggcctggcatg 284
Query: 361 cacagcttgtgatatgaactatctcacagaacatcctcccttgacaagcctattctatgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 cacagcttgtgatatgaactatctcacagaacatcctcccttgacaagcctattctatgt 224
Query: 421 tggaggaagaccctgtaagcatgaatgagcagacataccgtgacttgttgccactgtaat 480
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 223 tggaggaagaccctgtaagcatgaatgagcagacatactgtgacttgttgccactgtaat 164
Query: 481 ggactatggtttcctcacaatttgagcgttatctgcactctagtctgatctccccatata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 ggactatggtttcctcacaatttgagcgttatctgcactctagtctgatctccccatata 104
Query: 541 ctaggtttattaagaaacctaatcatagatttatcctttagacattactcaatggacttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 ctaggtttattaagaaacctaatcatagatttatcctttagacattactcaatggacttt 44
Query: 601 gagtatcctcaaattaaccagccaatatccgagcccattatca 643
||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 43 gagtatcctcaaattaaacagccaatatccgagcccattatca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space: 706496
Effective search space used: 706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no122_a07.g1 MSMg01no122_a07.g1 CHROMAT_FILE:
MSMg01no122_a07.g1 PHD_FILE: MSMg01no122_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:30:00 2005
(627 letters)
>mm_chr13_3353785_3354811
Length = 1027
Score = 1195 bits (618), Expect = 0.0
Identities = 624/626 (99%)
Strand = Plus / Plus
Query: 1 cttagagagatcataattcttgtcaagtgctttgaattcattaatctgcagtaaagaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttagagagatcataattcttgtcaagtgctttgaattcattaatctgcagtaaagaaat 260
Query: 61 aatatatagctcttaattgcttagcgtgggaggcttatggagtagtagactccaggttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatatatagctcttaattgcttagcgtgggaggcttatggagtagtagactccaggttac 320
Query: 121 catggttgtggatcttgtaagcaaagtgattcttctttaggaattaaaaggataactgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catggttgtggatcttgtaagcaaagtgattcttctttaggaattaaaaggataactgtt 380
Query: 181 gccagggacagcccaggggtgtttagaacctggattgatgggcatttctcaaagttgtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gccagggacagcccaggggtgtttagaacctggattgatgggcatttctcaaagttgtct 440
Query: 241 tctcaaacctggtagatcttccagagttcttgtgatggaaaaagagatgcagtcagtggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctcaaacctggtagatcttccagagttcttgtgatggaaaaagagatgcagtcagtggg 500
Query: 301 cttggggaaggcagtgcattccatccctgcctagaatgcagtcagcagagtagctgccca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttggggaaggcagtgcattccatccctgcctagaatgcagtcagcagagtagctgccca 560
Query: 361 catgtacacaacacaaggctgtcagcacctcccacagctactgagtgcactggggaaagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catgtacacaacacaaggctgtcagcacctcccacagctactgagtgcactggggaaagc 620
Query: 421 tggcctagaatcatttatacacactggaaatggagaaaagaagggaggtgggagggacta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tggcctagaatcatttatacacactggaaatggagaaaagaagggaggtgggagggacta 680
Query: 481 gtgaactattttggatttgtgacaatctgagaaagtgatttaaggttgacttcatcttta 540
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtgaactattttggatttgtgccaatctgagaaagtgatttaaggttgacttcatcttta 740
Query: 541 tatccttatactcttaaatccctacactgttataaaggaatgttcttttaatggactgtc 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 741 tatccttatactcttaaatccctacactgttataaaggaatgttcttttaatgggctgtc 800
Query: 601 tataagggagatggaagtctttctaa 626
||||||||||||||||||||||||||
Sbjct: 801 tataagggagatggaagtctttctaa 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space: 627489
Effective search space used: 627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
