Query= MSMg01no122_l18.b1 MSMg01no122_l18.b1 CHROMAT_FILE:
MSMg01no122_l18.b1 PHD_FILE: MSMg01no122_l18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:31:32 2005
(368 letters)
>mm_chr13_64366322_64367089
Length = 768
Score = 654 bits (338), Expect = 0.0
Identities = 361/372 (97%), Gaps = 8/372 (2%)
Strand = Plus / Plus
Query: 1 tgaaagctggggatggaaagatggctcagcc--c--ttaaatgagagcactgactgctct 56
||||||||||||||||||||||||||||||| | || ||||||||||||||||||
Sbjct: 201 tgaaagctggggatggaaagatggctcagccagcagtt----gagagcactgactgctct 256
Query: 57 tctgaaggtcctgagttcaaatcctagcaactacaaggtggctcacaaccatccataatg 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tctgaaggtcctgagttcaaatcctagcaactacaaggtggctcacaaccatccataatg 316
Query: 117 agatctgacgccctcttctggtgtgtctgaagacagctacagtgcactcacatataataa 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 agatctgacgccctcttctggtgtgtctgaagacagctacagtgcactcacatataataa 376
Query: 177 ataaataaataaataaattttagatagaaaatataaggacagtatatagtcttaactgct 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ataaataaataaataaattttagatagaaaatataaggacagtatatagtcttaactgct 436
Query: 237 aagccatctctcctgccttgtttttataatcaactctgtttttggaagcgtttttctaca 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aagccatctctcctgccttgtttttataatcaactctgtttttggaagcgtttttctaca 496
Query: 297 ataatctctgcataatattgaattctggtcacctaaaaacaaacaaataccaatagacac 356
|||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 497 ataatctctgcataatattgaagccaggtcacctaaaaacaaacaaataccaatagacac 556
Query: 357 catgggggcttg 368
||||||||||||
Sbjct: 557 catgggggcttg 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no122_l18.g1 MSMg01no122_l18.g1 CHROMAT_FILE:
MSMg01no122_l18.g1 PHD_FILE: MSMg01no122_l18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:31:32 2005
(623 letters)
>mm_chr13_64479628_64480650
Length = 1023
Score = 814 bits (421), Expect = 0.0
Identities = 421/421 (100%)
Strand = Plus / Minus
Query: 203 tagtaaccaaccccaaaataaaataaaataaaataaaataaaataaaataaaataaaata 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1023 tagtaaccaaccccaaaataaaataaaataaaataaaataaaataaaataaaataaaata 964
Query: 263 aaataaaataaaataaaataaaataaaataaaacaaagtctgagaacccaagttcagtcc 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963 aaataaaataaaataaaataaaataaaataaaacaaagtctgagaacccaagttcagtcc 904
Query: 323 ctgggacccacatggtagatggagagaaccaactctcacaaattgtcccctgacttctac 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 ctgggacccacatggtagatggagagaaccaactctcacaaattgtcccctgacttctac 844
Query: 383 atgtgtatgatggcccatgcatgtgcaactcatagaaatacaaaataaatgaagttattg 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 atgtgtatgatggcccatgcatgtgcaactcatagaaatacaaaataaatgaagttattg 784
Query: 443 ataaacaaataaataaatggcaccaagaacctggagacacctggcccagaccccgaccac 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 ataaacaaataaataaatggcaccaagaacctggagacacctggcccagaccccgaccac 724
Query: 503 cagttacgcttgcttgggtcagactatgtattttatactgaactcttactttgcatttca 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 cagttacgcttgcttgggtcagactatgtattttatactgaactcttactttgcatttca 664
Query: 563 gctagcatcttagcagtgaaccccaagaaacaataccttccttattcagaaaaagattgg 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gctagcatcttagcagtgaaccccaagaaacaataccttccttattcagaaaaagattgg 604
Query: 623 t 623
|
Sbjct: 603 t 603
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 66
Number of extensions: 21
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space: 620969
Effective search space used: 620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
