Query= MSMg01no124_m19.b1 MSMg01no124_m19.b1 CHROMAT_FILE:
MSMg01no124_m19.b1 PHD_FILE: MSMg01no124_m19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:23 2005
(650 letters)
>mm_chr13_80069977_80071027
Length = 1051
Score = 1201 bits (621), Expect = 0.0
Identities = 644/653 (98%), Gaps = 5/653 (0%)
Strand = Plus / Minus
Query: 1 accaatcttgtgattaaaagagtaatgcctt--acagattgccatcccatatcttaagat 58
||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 851 accaatcttgtgattaaaagagtaatg--gtaaacagattgccatcccatatcttaagat 794
Query: 59 ctattatataccatactaatgaacttgataatattccaaataacccattctcaaacagat 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 ctattatataccatactaatgaacttgataatattccaaataacccattctcaaacagat 734
Query: 119 attctgaagtacaagagcttttccatggcaattaaattgatattttactgtaagtgcttt 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 attctgaagtacaagagcttttccatggcaattaaattgatattttactgtaagtgcttt 674
Query: 179 atagaagcttatagctattatggcattttaaaaaacaaaccaacaac-aaaaaacaacct 237
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 673 atagaagcttatagctattatggcattttaaaaaacaaaccaacaacaaaaaaacaacct 614
Query: 238 ccagttttgttcattacacttttaagagctaaatattacatgtagctagaagaattattg 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ccagttttgttcattacacttttaagagctaaatattacatgtagctagaagaattattg 554
Query: 298 tgtgattaacagatatcacctgttttcataactcatggttgttccatattgattaagttg 357
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 553 tgtgattaacagatatcacctgggctcataactcatggttgttccatattgattaagttg 494
Query: 358 aaagttacctaagcacatgataacgttcttgctaaaaaatctgaaaactgtttttgcatg 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 aaagttacctaagcacatgataacgttcttgctaaaaaatctgaaaactgtttttgcatg 434
Query: 418 tgattatgtgaaaacttttaatccacaatcaaaattaagctagtacctcagaaatatgat 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tgattatgtgaaaacttttaatccacaatcaaaattaagctagtacctcagaaatatgat 374
Query: 478 gataaaacttgttctatgatactggtttaggtagtaaataattccccagattcaagaagc 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gataaaacttgttctatgatactggtttaggtagtaaataattccccagattcaagaagc 314
Query: 538 ccattatagatttaatgtgacaacagagtatgttatacactttttagtaactgtacagtg 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ccattatagatttaatgtgacaacagagtatgttatacactttttagtaactgtacagtg 254
Query: 598 gaggctggataatccattcttatctggtattcctactcatcctgtcaaagtta 650
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gaggctggataatccattcttatctggtattcctactcatcctgtcaaagtta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1051
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1041
Effective search space: 666240
Effective search space used: 666240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no124_m19.g1 MSMg01no124_m19.g1 CHROMAT_FILE:
MSMg01no124_m19.g1 PHD_FILE: MSMg01no124_m19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:23 2005
(332 letters)
>mm_chr13_79900074_79900807
Length = 734
Score = 580 bits (300), Expect = e-170
Identities = 325/334 (97%), Gaps = 2/334 (0%)
Strand = Plus / Plus
Query: 1 atttacttagaggtactttccaatatttaaacaattcttaactttcaaa--tatacattt 58
|||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||
Sbjct: 201 atttacttagaggtactttccaatatttaagcagttcttaactttcaaaaatatacattt 260
Query: 59 atattttgaagagcaaacactttttctccattagtctgaattcattaaaggcagattgat 118
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 261 atattttgaagagcaaacactttttctccattagtctgagttcattaaaagcagattgat 320
Query: 119 aagatacagtggatattaaaagtaagtaattcaagaaggatagttgaaagagtataattt 178
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagatacagtggatattataagtaagtaattcaagaaggatagttgaaagagtataattt 380
Query: 179 tagactcaaacataaatatcaggttctgattcctttgtgttggataagccaatcagatat 238
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 tagactcaaacataaatatcaggttctgattcctttgtgttggataagccaatcagttat 440
Query: 239 accaagtctcaggagtcaaacaattatacgtgaaaattatgttcttcactggaattttat 298
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 accaagtctcaggagtcaaacaattatacgtgaaaattatgctcttcactggaattttat 500
Query: 299 aatgaattaagcaagtgggcacatgaggtaataa 332
||||||||||||||||||||||||||||||||||
Sbjct: 501 aatgaattaagcaagtgggcacatgaggtaataa 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 734
Length adjustment: 9
Effective length of query: 323
Effective length of database: 725
Effective search space: 234175
Effective search space used: 234175
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
