Query= MSMg01no126_e19.b1 MSMg01no126_e19.b1 CHROMAT_FILE:
MSMg01no126_e19.b1 PHD_FILE: MSMg01no126_e19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:37 2005
(651 letters)
>mm_chr13_13601174_13602225
Length = 1052
Score = 596 bits (308), Expect = e-174
Identities = 323/328 (98%), Gaps = 1/328 (0%)
Strand = Plus / Minus
Query: 5 gaattcctgcaaagcac-caagcacagagagtgcatatgcatctgatgttctccatgggg 63
||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 532 gaattcctgcaaagcacaaaagcacagggagtgcacatgcatctgatgttctccatgggg 473
Query: 64 tcaggcagcctcttctgcggcttggaaaagacatggtggtcttgctctctgtggatctgt 123
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 tcaggcagcctcttctgtggcttggaaaagacatggtggtcttgctctctgtggatctgt 413
Query: 124 ttctccctccccctaggctgggtcaagccagtagttcactggcttttttaaaaaagggcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ttctccctccccctaggctgggtcaagccagtagttcactggcttttttaaaaaagggcc 353
Query: 184 aaaacaatctaactctcccctctgctctaaattccaggtgacatatagcctctcttagcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 aaaacaatctaactctcccctctgctctaaattccaggtgacatatagcctctcttagcc 293
Query: 244 agctacttccttggtgtgaccctccatttgaggacggtctgatccagaaacagctgtgaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 agctacttccttggtgtgaccctccatttgaggacggtctgatccagaaacagctgtgaa 233
Query: 304 aatattgcagtttaaaaactacattgat 331
||||||||||||||||||||||||||||
Sbjct: 232 aatattgcagtttaaaaactacattgat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1052
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1042
Effective search space: 667922
Effective search space used: 667922
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no126_e19.g1 MSMg01no126_e19.g1 CHROMAT_FILE:
MSMg01no126_e19.g1 PHD_FILE: MSMg01no126_e19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:38 2005
(342 letters)
>mm_chr13_13471807_13472547
Length = 741
Score = 617 bits (319), Expect = 0.0
Identities = 337/343 (98%), Gaps = 2/343 (0%)
Strand = Plus / Plus
Query: 1 acgggagctcatccaaacttacagagatgaggtagcacgcacagggcctgcatgggtcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 acgggagctcatccaaacttacagagatgaggtagcacgcacagggcctgcatgggtcta 259
Query: 61 caccaggccttccgcatgtatatcatggcttccagtctagtgtttctatgggattcctga 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 caccaggccttcctcatgtatatcatggcttccagtctagtgtttctatgggattcctga 319
Query: 121 gtgtgcagatgagggggtctctgatttttaggtcttctcttaggctcttttccttctgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtgtgcagatgagggggtctctgatttttaggtcttctcttaggctcttttccttctgtt 379
Query: 181 ggtctgtcttgtccaactttgaggtgatatagtttttgtttttt-cttatattttattgt 239
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 380 ggtctgtcttgtccaactttgaggtgatatagtttttgtttttttcttatgttttattgt 439
Query: 240 tatatttttatatacatgaatgtatgactaagcgaatgaaaacctagccactagggtaaa 299
|||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 440 tatatttttaaa-acatgaatgaatgactaagcgaatgaaaacctagccactagggtaaa 498
Query: 300 ggttaaagactgaatggccacatatacctgcctgctggcggaa 342
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ggttaaagactgaatggccacatatacctgcctgctggcggaa 541
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 741
Length adjustment: 9
Effective length of query: 333
Effective length of database: 732
Effective search space: 243756
Effective search space used: 243756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
