Query= MSMg01no126_k02.b1 MSMg01no126_k02.b1 CHROMAT_FILE:
MSMg01no126_k02.b1 PHD_FILE: MSMg01no126_k02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:05 2005
(428 letters)
>mm_chr13_89682422_89683251
Length = 830
Score = 783 bits (405), Expect = 0.0
Identities = 421/427 (98%), Gaps = 2/427 (0%)
Strand = Plus / Minus
Query: 4 ggaattccactgggaatccactaaactgctcagacagaccttgacttttaatctacatac 63
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 ggaattccactggtaattcactaaactgctcagacagaccttgacttttaatctacatac 571
Query: 64 aaattaaccttgttttgatttctattcttagtatccactccccagtctgtcacttagtta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 aaattaaccttgttttgatttctattcttagtatccactccccagtctgtcacttagtta 511
Query: 124 agggtaaaatgtatcaaccaaacaaactagtcaatttttatgtaattgacccccaaacca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 agggtaaaatgtatcaaccaaacaaactagtcaatttttatgtaattgacccccaaacca 451
Query: 184 gtgaatttatagaggctggtaagaaagccttctgtatatgtccactaggtggcgataagg 243
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 450 gtgaatttatagaggctggtaagaaagccttctgtataagtccactaggtggcgataagg 391
Query: 244 gaccatgcttcaccctaacttacaga--cttccattcatacagtaaatgaagagctgtga 301
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 390 gaccatgcttcaccctaacttacagactcttccattcatacagtaaatgaagagctgtga 331
Query: 302 tattaatttataccatcgtgccctcgctacatctaatatttgtttaatcagctgtttcct 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tattaatttataccatcgtgccctcgctacatctaatatttgtttaatcagctgtttcct 271
Query: 362 ctaatcctgctcagacaatattgattaaaatctctagcctagtcatattctgttgttttt 421
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 270 ctaatcctgctcagacaatattgattaaaatctctagcatagtcatattctgttgttttt 211
Query: 422 ttttttt 428
|||||||
Sbjct: 210 ttttttt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 830
Length adjustment: 9
Effective length of query: 419
Effective length of database: 821
Effective search space: 343999
Effective search space used: 343999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no126_k02.g1 MSMg01no126_k02.g1 CHROMAT_FILE:
MSMg01no126_k02.g1 PHD_FILE: MSMg01no126_k02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:05 2005
(152 letters)
>mm_chr13_89519581_89520132
Length = 552
Score = 255 bits (132), Expect = 7e-73
Identities = 147/152 (96%)
Strand = Plus / Plus
Query: 1 tgagctattatgccaaattattgatttagaacttcttgaactttatataaacttacattc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 tgagctattatgccaaattattgatttagaacttcttgaactttatataagcttacattc 260
Query: 61 acagatatggaaaatacccttaaataagtcaggaaatatagcttttatgatccctaagag 120
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 261 acagatatggaaaatacccttaaataagtcaggaaatagagcttttatggtccctaagag 320
Query: 121 aacacccactgtagctgctaaaggtagtagaa 152
| ||||||| ||||||||||||||||||||||
Sbjct: 321 agcacccacagtagctgctaaaggtagtagaa 352
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 152
Length of database: 552
Length adjustment: 8
Effective length of query: 144
Effective length of database: 544
Effective search space: 78336
Effective search space used: 78336
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
