ATCAAAATTTGCGGCGCTAAACGACTCCTATATTCCAAAATCCGCGGAAT
TCCAATTATAGTTTACTTTCAAGTATAAGTAGACACATGGGTAGAAAACC
TGACAATACAATTTAGAGCAACTGCACACGCGACATGAAACCCTAACTAA
ACAGCACTGTTTACATACTGTGTGCCGAAAATTGGGTGCAACGGATTTTT
TTTTTTGAACGACTTTTTCCCTGTAAATGATAAAGGGTAAAAGACGTCGT
GTTGGCTGCACTGAATAGAGCAAATTTGTCGATTCTTCATCCTTTCCCTG
GTCTTAGAACAATTCTTCTATTTAAGATTGACATATATAAGAAGCCTGGC
TCTTCCTTCTCATATAACGTCACAGCAAAGCTCCAACAATCAGCTTGCCA
AAGGATAAGACCTCATGAAAATTCTCCTACTGAGGAAGCCAGAGTCACCT
CTGCTACAAACTCATGGACACACACACACACACACACACACACACACACA
CACACACCTACCCAGAAAAACCAGAAGAACAGCCTAGACAACCAGCCTCC
CTGGGTCGGGCCCCCTCTTCCACCACAGCCCCAACCCCCCTTCCTGCTGC
CATGCTTCCCAACAGATAATATTCCTGCAAATGACAGGAGAAGTCTATAT
TCCCCTGCAACTTGGGCCTGACCCCCTCTCACATTAGGTTA

CCTGTTTTTTCTCGCCGCCTGCGTTGTTTTTCGACAATCTGGTTGCTCGA
CTATCCACCTTCTCGCGTATACGCCTACGGTGCCTCCTCGTCTGNACACT
TTTCACTGTTGTCCGATCGCCCGCTATGTGCTGTACTCCGCTTGTCGTAC
TTACTGTTCGTGCGCTCATTTCGCACTCAGCCCTTCCTGTCAACTTTTCT
CTCCGCCCATGTTCGTGCCATATCATAGTGCGTTGTTGCCATTTACCTCT
TTGCAGTTTATTACACTTCGCTTTCCAATGCTTCATATCTTTTCGCGCTT
ATGCTGTTGCTACATGCTACGCACGCCGCCGTTTCGTGTGCTATTTTTAT
AGCATACCTATTACTCACTTCCATATCAGCTCAGCGTAACCTTACGATGT
CAATTCTGTCGCGCTAACCGCAGTGACAACCCAATTAGATACGTATAATC
TTGTACACTAAGGAGACATAATGGTGCAGGAAGTTGTACGCAACATTGTA
ATCTATAGACTTGCCTAATATCATCTAAATTTATCTCCCTCCATATCCAT
AATGCATATATATAGTCATAAGTCACTAACATTCAAGCAAAGGGTATATC
TTAGAAGCGACGATGAACGTATCCCTTTTATTTCATACAAATAGCGTTGT
TATGCACCTAGAATACATATTAATAATCATTTACTGACAGTGAAGTAATT
ACCACTCTCGAAGAATACAACGATTATTCACTACACAGTATCAATCGCTA
AATTNCGTCATCTTACATGCAGATTACAACCAGCGAATATACACTCAGCC
GCATACACAATAAATACTAATAAACTCGCAAATTCACGAGACGCTCAGGA
CTGTGACTTAATATTTTTAACATAGCGTATCTACGACCGTCGATTTTACA
ACTATAGCTCAATAGTAAACAACGAAAACAACATAGCGTATGCATAAATA
CTTACGAGT

Query= MSMg01no126_p20.b1 MSMg01no126_p20.b1 CHROMAT_FILE:
MSMg01no126_p20.b1 PHD_FILE: MSMg01no126_p20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:35 2005
         (544 letters)



>mm_chr13_31884552_31885497
          Length = 946

 Score =  963 bits (498), Expect = 0.0
 Identities = 527/546 (96%), Gaps = 16/546 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   caagtataagtagacacatgggtagaaaacctgacaatacaatttagagcaactgcacac 60
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 caagtataagtagacacatgggtagaaaacctgacaatacaatttacagcaactgcacac 260

                                                                       
Query: 61  gcgacatgaaaccctaactaaacagcactgtttacatactgtgtgccgaaaattgggtgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcgacatgaaaccctaactaaacagcactgtttacatactgtgtgccgaaaattgggtgc 320

                                                                       
Query: 121 aacggattttttttttt--gaacgactttttccctgtaaatgataaagggtaaaagacgt 178
           |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacggatttttttttttttgaacgactttttccctgtaaatgataaagggtaaaagacgt 380

                                                                       
Query: 179 cgtgttggctgcactgaatagagcaaatttgtcgattcttcatcctttccctggtcttag 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgtgttggctgcactgaatagagcaaatttgtcgattcttcatcctttccctggtcttag 440

                                                                       
Query: 239 aacaattcttctatttaagattgacatatataagaagcctggctcttccttctcatataa 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacaattcttctatttaagattgacatatataagaagcctggctcttccttctcatataa 500

                                                                       
Query: 299 cgtcacagcaaagctccaacaatcagcttgccaaaggataagacctcatgaaaattctcc 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cgtcacagcaaagctccaacaatcagcttgccaaaggataagacctcatgaaaattctcc 560

                                                                       
Query: 359 tactgaggaagccagagtcacctctgctacaaactcatggacacacacacacacacacac 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tactgaggaagccagagtcacctctgctacaaactcatggacacacacacacacacacac 620

                                                                       
Query: 419 acacacacacacacacacacctacccagaaaaaccagaagaacagcctagacaaccagcc 478
           ||||||||||              ||||| ||||||||||||||||||||||||||||||
Sbjct: 621 acacacacac--------------ccagagaaaccagaagaacagcctagacaaccagcc 666

                                                                       
Query: 479 tccctgggtcgggccccctcttccaccacagccccaaccccccttcctgctgccatgctt 538
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tccctgggccgggccccctcttccaccacagccccaaccccccttcctgctgccatgctt 726

                 
Query: 539 cccaac 544
           ||||||
Sbjct: 727 cccaac 732


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 946
Length adjustment: 10
Effective length of query: 534
Effective length of database: 936
Effective search space:   499824
Effective search space used:   499824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)