Query= MSMg01no127_a03.b1 MSMg01no127_a03.b1 CHROMAT_FILE:
MSMg01no127_a03.b1 PHD_FILE: MSMg01no127_a03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:37 2005
(514 letters)
>mm_chr13_57130569_57131482
Length = 914
Score = 932 bits (482), Expect = 0.0
Identities = 506/514 (98%)
Strand = Plus / Minus
Query: 1 acctcacacgtgagctcaaatgtacttctaatgacgggtataacaatgtcttttgttata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 acctcacacgtgagctcaaatgtacttctaatgacgggtataacaatgtcttttgttata 655
Query: 61 gaggaaaaatatcaaaaaaacccaaatagccaccggtggggaaatggctaaatgaattat 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 gaggaaaaatatcaaaacaacccaaatagccaccggtggggaaatggctaaatgaattat 595
Query: 121 ggcatgtccttttagaaaagttagcattgccatataaaagataaagctccttctatggga 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 594 ggcatgtccttttagaaaagttagcattgctatataaaagataaagctccttctatggga 535
Query: 181 gctcatgaagatatctcaaatatgctagtggacagaaggaaacagaagagcaaattaccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 gctcatgaagatatctcaaatatgctagtggacagaaggaaacagaagagcaaattaccc 475
Query: 241 tgctctgtgtcaaatgaatgtctgaacagcccagagatatacgtgtaaatgtacacagca 300
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tgctctgtgttgaatgaatgtctgaacagcccagagatatacgtgtaaatgtacacagca 415
Query: 301 gcaactgttttctactttaaaacagtcagatggcaacataattcccatcccgctccactc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 gcaactgttttctactttaaaacagtcagatggcaacataattcccatcccgctccactc 355
Query: 361 ggttcacacatttagcgcgtgtgattcatggcttcgattatatccagtcatgcaggcatc 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 ggttcacacatttagcgcgtgtgattcatggcttcgattatatccagtcatgcaggcatt 295
Query: 421 aacatcatcaacgtgagaacacttcatctacggagaacggaagctcggacccattggcga 480
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gacatcgtcaacgtgagaacacttcatctacggagaacggaagctcggacccattggcga 235
Query: 481 ccatttccaggcttccttgactcctcctccctgc 514
||||||||||||||||| ||||||||||||||||
Sbjct: 234 ccatttccaggcttcctcgactcctcctccctgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no127_a03.g1 MSMg01no127_a03.g1 CHROMAT_FILE:
MSMg01no127_a03.g1 PHD_FILE: MSMg01no127_a03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:37 2005
(566 letters)
>mm_chr13_56971548_56972517
Length = 970
Score = 1021 bits (528), Expect = 0.0
Identities = 558/570 (97%), Gaps = 4/570 (0%)
Strand = Plus / Plus
Query: 1 actcagtcactcatctcatcatcggagatgaaccaagcactagccaccacccctgagaca 60
|||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 actcagtcactcatcttgtcatcggagatgaaccaagcactagccgggacccctgagaca 260
Query: 61 tggggagtgggcaggggtgccttgtctccaagagactggtggttcaaagggaccgatgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggggagtgggcaggggtgccttgtctccaagagactggtggttcaaagggaccgatgcc 320
Query: 121 aatggaagccctgtggtgggtcagaaggtgagctctcctacttgtgaaagtggagctcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatggaagccctgtggtgggtcagaaggtgagctctcctacttgtgaaagtggagctcaa 380
Query: 181 ttcctctacagtcagcttgtcactaactcctgggaaaacatttcctttcaaacaaacact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcctctacagtcagcttgtcactaactcctgggaaaacatttcctttcaaacaaacact 440
Query: 241 attggtaagattcaaaaacggggtaagaatttgctaatctaaaggcggagtga----ctt 296
||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 441 attggtaagattcaaaaaccgggtaagaatttgctaatctaaaggcggagtgagtgactt 500
Query: 297 ccagcaacgtcctgttggaaagaggttttacccagtccagcgtgcgctcactgagctgcc 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccagcaacgtcctgttggaaagaggttttacccagtccagcgtgcgctcactgagctgcc 560
Query: 357 ttgcactggagctatcaggagtgatggtggagttcttctccttgcccacagagacattgt 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 561 ttgcactggagctatcaggagtgatggtggagttcttctccttgcccacagagacatcgt 620
Query: 417 ttcacaggtagattagtttatacgtgataagtgttaaatggtcactgagcctaggaccac 476
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcaccggtagattagtttatacgtgataagtgttaaatggtcactgagcctaggaccac 680
Query: 477 caagtactcactgcatgacagaggcagccataagccaggcaagtggctgctactctggtg 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caagtactcactgcatgacagaggcagccataagccaggcaagtggctgctactctggtg 740
Query: 537 gaccttgcctttccctggggggaaggacag 566
||||||||||||||||||||||||||||||
Sbjct: 741 gaccttgcctttccctggggggaaggacag 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 970
Length adjustment: 10
Effective length of query: 556
Effective length of database: 960
Effective search space: 533760
Effective search space used: 533760
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
