Query= MSMg01no127_g18.b1 MSMg01no127_g18.b1 CHROMAT_FILE:
MSMg01no127_g18.b1 PHD_FILE: MSMg01no127_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:09 2005
(124 letters)
>mm_chr13_102089702_102090225
Length = 524
Score = 170 bits (88), Expect = 2e-47
Identities = 115/124 (92%)
Strand = Plus / Plus
Query: 1 gatgtgagaatgagtatgtaaatcaaccagctagttaccgagaccgaaatgatgggcagg 60
|||||||||||||| ||| ||||||| |||||||||||| |||||||||||||||| |||
Sbjct: 201 gatgtgagaatgagcatgcaaatcaatcagctagttacccagaccgaaatgatgggtagg 260
Query: 61 tgaaaagaagctcttaaattgccagtctctggaagcttttggttttccgcggcgagtcac 120
||| |||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 261 tgagaagaggctcttaaattgccagtctctggaagcttttggttttcctcggtgagtcac 320
Query: 121 agta 124
||||
Sbjct: 321 agta 324
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 124
Length of database: 524
Length adjustment: 8
Effective length of query: 116
Effective length of database: 516
Effective search space: 59856
Effective search space used: 59856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no127_g18.g1 MSMg01no127_g18.g1 CHROMAT_FILE:
MSMg01no127_g18.g1 PHD_FILE: MSMg01no127_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:09 2005
(197 letters)
>mm_chr13_102238746_102239342
Length = 597
Score = 352 bits (182), Expect = e-102
Identities = 194/198 (97%), Gaps = 2/198 (1%)
Strand = Plus / Minus
Query: 1 ttgctaggataccaagtgc-aacacacagttaggggggttgaggcttgagctgatctctg 59
||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 397 ttgctaggataccaagtgcaaacacacagtta-gggggttgaggcttgagctgatctctg 339
Query: 60 aataaatagaagtccgatctaggtggaaagggtaggtgctgtggaccaaggaggttcagg 119
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 338 aataaatagaagtccgatctaggtggaaagggtaggtactgtggaccaaggaggttcagg 279
Query: 120 tggaaaaagatgtgttacggttaagacaggagcccagaagggccatgtgcacagctgtgg 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gggaaaaagatgtgttacggttaagacaggagcccagaagggccatgtgcacagctgtgg 219
Query: 180 ggtttttcatatgccaag 197
||||||||||||||||||
Sbjct: 218 ggtttttcatatgccaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 197
Length of database: 597
Length adjustment: 8
Effective length of query: 189
Effective length of database: 589
Effective search space: 111321
Effective search space used: 111321
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
