CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATCCCATATACCGTTACCAAACCCAGACACTATTGTGGATGCCAT
GAAGTACATGCTGAAAGGATCCTGCATATGACTGTCTCCTGATAGGCCCT
GCCAGAGCCTTATAAATACAGAGGTGGATGTTCACAGCCAACCATTGGAC
AGAGCACAGGGTGCCTAATAGAGGAGTTAGAGAAGGGACTGGAGGAGTTG
TAGGGGTTTTCAGCCCCACAGGAAGAATGACAATATCAACCAACCAGACC
CCCAGAACTCCCAGGGACTAAGATATCAACAAAGGAGCACACATGGCTCC
AGTTGCATATGTAGCATAGGATGGCCTTGTCATACATCAATGGAAGGAGA
GGTCCTTGGTCCTATCACCCCTCAATAGATGCCCCAGTGTAGGGGAATCA
AGGGTGGTGAGATGGCAGTGTTTGCGTGGTTATTCTTCTCACATTTTTTT
CTTTCCCAGTTCTCTTCCCCCTTTCAATCCTCCTTCTTTTCCCTCCCCCG
TCCTCCCTTCTTAACCTCCCCTCCTCTGCATTAACCCCATTTATCATTGT
CCCTTCTACCTCTTACTTTGCCCCATTTCTTCCTTGTTTTTTTATTTTTT
CCTACCTTTCCTTCCCCTTTTTAATGTTCCTTTCTCTCCCGACCTTTTTT
CCTCCTTCCCTTTTATCCCTTTCTTTATTTTTATTCGTTTTCCCCGTCCC
CTTGTCCCCTCTCT

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXATCTCATCAGTCACGCGCAGTCCTT
TCTATCCATTGAACCATTTCCCTCCCCCATGTTAAAATTTGAGTTTAACA
ATCACTGAATTTTATTTATAAGAATTACTTGCAAGTTCAAAAAGTTACCT
ATTTATAAATCAGGCCGAGCCAGCCTGCAATTGAGTCAGTGCTCCCTCAA
GGGGGCAGGGTGGGAGAACTTTTATCCTGTGTTTCTGGGAGTATTTTAAA
TAATGTATCTAATATGTAGTATATATTTAAGGAACTACTTTTTATGTATG
TTAATATATGATTGGCTGAATCATAAGTCTTCTAATTAGAGGTTGCTTTA
CTTGTTTGTCTATTGACCCCATGTTATAAAGATGTGGCTTGGTTTGTGTT
CTACGGGAGACCGAAGCCTAGAGCTCTTTCAGCCAATAGCTTTCCAAAAA
TATATATGAATATATATATATATATATATATATATATATAATAACAGATT
TAGTTCCTTTGAATTTAGGATTTATGAGATTAATGATAAATATTAATTTA
AAAATTGTCAGTGGCTACACTGTTTGCGAAATAATTATACAACAAAGCAT
GAGAGCTGGTTCCTCTGTGAATATTGTATCTACATTACTTAGTTAGGAAT
AAGAAAAAATCTTCTTTTCCTCCTAAGCAN

Query= MSMg01no129_a15.g1 MSMg01no129_a15.g1 CHROMAT_FILE:
MSMg01no129_a15.g1 PHD_FILE: MSMg01no129_a15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:19 2005
         (558 letters)



>mm_chr13_11691410_11692372
          Length = 963

 Score =  855 bits (442), Expect = 0.0
 Identities = 531/566 (93%), Gaps = 18/566 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   atctcatcagtcacgcgcagtcctttctatccattgaaccatttccctcccccatgttaa 60
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 atctcatcagtcacacgcagtcctttctatccattgaaccatttccctcccccatgttaa 570

                                                                       
Query: 61  aatttgagtttaacaatcactgaattttatttataagaattacttgca-agttcaaaaag 119
           |||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||
Sbjct: 569 aatttgagtttaacaatcactgaattttatttataagaattacttg-agagttc-aaaag 512

                                                                       
Query: 120 ttacctatttataaatcaggccgagccagcctgca-attgagtcagtgctccctcaaggg 178
           ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |
Sbjct: 511 ttacctatttataaatcaggccgagccagcctgcaga-tgagtcagtgctccctcaagtg 453

                                                                       
Query: 179 ggcagggtgggagaacttttatcctgtgtttctgggagtattttaaataatgtatctaat 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 452 ggcagggtgggagaacttttatcctgtgtttctgggagtattttaaataatgtgtctagt 393

                                                                       
Query: 239 atgtagtatatatttaaggaactactttttatgtatgttaatatatgattggctgaatca 298
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 392 atgtagtatatatttaaggaactactttttatgtatgttaatatatgattggctgaataa 333

                                                                       
Query: 299 taagtcttctaattagaggttgctttacttgtttgtc------tattgaccccatgttat 352
           |||| ||||||||||||||||||||| ||||||||||      |||||| | ||||||||
Sbjct: 332 taaggcttctaattagaggttgctttgcttgtttgtccctgactattgagctcatgttat 273

                                                                       
Query: 353 aaagatgtggcttggtttgtgttctacgggagaccgaagcctagagctctttcagccaat 412
           |||||| | ||| |||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 272 aaagatatagctcggtttgtgttctgcaggagaccgaagcctagagctctttcagccaat 213

                                                                       
Query: 413 agctttccaaaaatatatatgaatatatatatatatatatatatatatatataataacag 472
           |||||||||||||||||||||  ||||||| | |||| |   ||||||||||||||||||
Sbjct: 212 agctttccaaaaatatatatg--tatatatgt-tata-a---atatatatataataacag 160

                                                                       
Query: 473 atttagttcctttgaatttaggatttatgagattaatgataaatattaatttaaaaattg 532
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 attcagttcctttgaatttaggatttatgagattaatgataaatattaatttaaaaattg 100

                                     
Query: 533 tcagtggctacactgtttgcgaaata 558
           |||||||||||||||||||| |||||
Sbjct: 99  tcagtggctacactgtttgctaaata 74


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 963
Length adjustment: 10
Effective length of query: 548
Effective length of database: 953
Effective search space:   522244
Effective search space used:   522244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)