XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGAAATCCGCGGAATTCT
GCAGTCTCTCCTTTTCTGTACCTTGGCCAGCTGTGGGTCTGTATGCTGTT
CAGCATCGATTGCAAACAGAAGCTTCTGCATTGAAGATTGAGAGAAAACA
TATTCGAATAGTAAGTCACTGGAATTGGTTTCCTATCATTTCTGTCTGAC
ATAATAATTGTAAGTGGGTTCTCTCCTAAAATGTTTACACACATATATAT
GAAAAAGAAAACTGTTTATTAATCAGAATTTTCAGTTTTAAACATTTGGC
AATTGCGCAAGTTATCTTAAAGTTGGGAAGAAGTTATGTGTCCCAAAGGG
GCACTTAAAATGCCATTCAGCAGTGTTTGTTGAGACTACCCAAGATCAGG
CCGCATAGCACGGTGATGAAAGCCAGCCATCTGGTTCTGGATTTCATAAA
GATGTCAACTGCTCCAAAATCAACATTGTGACCTTAAACAAGGCTCACAT
CTCATGATTCAAATTCTGTAACTGCTAAATGAGAGTATTGAGAATAATTG
AGATAATCACTACGACACTGACTAATGTGTGGATCAAAGAGAATAATGAA
CATATAGCAGTTATTATCATCTTTCAAAATACTTACTTGAAGTCAATTGA
AATTTATAATATAATAAACCATGTAGGAGTTGGTAGCCAAAGCAAGGTTA
TGA

ATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAACTTTTATCATGAATGG
GTGTTGGATCTTGTCAAATGCTTTTTCTGCATCTAACGAGATGATCATGT
GGTTTTTGTCTTTGAGTTTGTTTATATAATGGATTACATTGATGGATTTT
CGTATATTAAACCATCCCTGCATCCCTGGAATAAAACCTACTTGGTCAGG
ATGGATGATTTCTTTAATGTGTTCTTGGATTCGGTTAGCGAGAATTTTAT
TAAGGATTTTTGCATCGATATTCATAAGAGAAATTGGTCTGAAGTCCTCT
ATCTTTGTTGTATCTCCNTGCGGNCCCACGTATCAGAGTAATAGTGGCTT
CATAAAATGAGTTGGGTAGAGAACCTTCTACTTCTATCTTGTGAAATAGT
TTGTGCAGAACTGGAATTAGATCTTCTTTGAAGGTCTGATAGAACTCTGC
ACTAAACCCATCTGGTCCTGGGCTTTTTTTGGTTGGGAGACTATTAATAA
CTGCTTCTATTTCTTTAGGGGATATGGGACTGTTTAGAAGGTCAACTTGA
TCCTGATTCAACTTTGGTACCTGGTATCTGTCCAGAAATTTGTCCATTTC
GTCCAGGTTTTCCAGTTTTGTTGCGTATAAGCTTTTGTAGAAGGATCTG

Query= MSMg01no132_n21.b1 MSMg01no132_n21.b1 CHROMAT_FILE:
MSMg01no132_n21.b1 PHD_FILE: MSMg01no132_n21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:30 2005
         (664 letters)



>mm_chr13_7799627_7800690
          Length = 1064

 Score = 1253 bits (648), Expect = 0.0
 Identities = 657/660 (99%)
 Strand = Plus / Minus

                                                                        
Query: 5    gaattctgcagtctctccttttctgtaccttggccagctgtgggtctgtatgctgttcag 64
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1049 gaattctgcagtctctcattttctgtaccttggccagctgtgggtctgtatgctgttcag 990

                                                                        
Query: 65   catcgattgcaaacagaagcttctgcattgaagattgagagaaaacatattcgaatagta 124
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 989  catcgattgcaaacagaagcttctgcattgaagattgagagaaaacatattcgaatagta 930

                                                                        
Query: 125  agtcactggaattggtttcctatcatttctgtctgacataataattgtaagtgggttctc 184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 929  agtcactggaattggtttcctatcatttctgtctgacataataattgtaagtgggttctc 870

                                                                        
Query: 185  tcctaaaatgtttacacacatatatatgaaaaagaaaactgtttattaatcagaattttc 244
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869  tcctaaaatgtttacacacatatatatgaaaaagaaaactgtttattaatcagaattttc 810

                                                                        
Query: 245  agttttaaacatttggcaattgcgcaagttatcttaaagttgggaagaagttatgtgtcc 304
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 809  agttttaaacatttggcaattacgcaagttatcttaaagttgggaagaagttatgtgtcc 750

                                                                        
Query: 305  caaaggggcacttaaaatgccattcagcagtgtttgttgagactacccaagatcaggccg 364
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749  caaaggggcacttaaaatgccattcagcagtgtttgttgagactacccaagatcaggccg 690

                                                                        
Query: 365  catagcacggtgatgaaagccagccatctggttctggatttcataaagatgtcaactgct 424
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689  catagcacggtgatgaaagccagccatctggttctggatttcataaagatgtcaactgct 630

                                                                        
Query: 425  ccaaaatcaacattgtgaccttaaacaaggctcacatctcatgattcaaattctgtaact 484
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 629  ccaaaatcaacattgtgaccttaaacaaggatcacatctcatgattcaaattctgtaact 570

                                                                        
Query: 485  gctaaatgagagtattgagaataattgagataatcactacgacactgactaatgtgtgga 544
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569  gctaaatgagagtattgagaataattgagataatcactacgacactgactaatgtgtgga 510

                                                                        
Query: 545  tcaaagagaataatgaacatatagcagttattatcatctttcaaaatacttacttgaagt 604
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509  tcaaagagaataatgaacatatagcagttattatcatctttcaaaatacttacttgaagt 450

                                                                        
Query: 605  caattgaaatttataatataataaaccatgtaggagttggtagccaaagcaaggttatga 664
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449  caattgaaatttataatataataaaccatgtaggagttggtagccaaagcaaggttatga 390


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space:   689316
Effective search space used:   689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)