Query= MSMg01no133_e13.b1 MSMg01no133_e13.b1 CHROMAT_FILE:
MSMg01no133_e13.b1 PHD_FILE: MSMg01no133_e13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:03 2005
(387 letters)
>mm_chr13_55841629_55842408
Length = 780
Score = 659 bits (341), Expect = 0.0
Identities = 373/387 (96%), Gaps = 9/387 (2%)
Strand = Plus / Minus
Query: 1 cagcctgggggagggcaagacccaattctggggaggcagcaggaagggcctcctctcc-a 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 579 cagcctgggggagggcaagacccaattctggggaggcagcaggaagggcctcct-tccaa 521
Query: 60 ttgctacagaccagcccgctgtcccagcgacaccgacaccatctgaaaacaaacgcctct 119
||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 520 ttgctacagaccagcccgctgtcccagcgacactg------tctgaaaacaaacgcctcc 467
Query: 120 ataattccctaaggcctaagcgttattgtcttgtccgttaaacttaacgcaagccactct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 ataattccctaaggcctaagcgttattgtcttgtccgttaaacttaacgcaagccactct 407
Query: 180 tgcccacttcatcctgctaatgtcagcacaagcactttacaaactctcaactctacactt 239
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 406 tgcccacttcatcctgctaatgtcagcgcaagcactttacaaactctcaactctacactt 347
Query: 240 aggccttagacaaataaaagcaaattacagatgtgaaatttgtgtcaatgagcttcatga 299
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 346 aggccttagacaaataaaagcaaattacaaatgtgaaatttgtgtcaatgagcttcatga 287
Query: 300 caatttttttttttaatttggtcataattacggcatttctagaagaatgtctgctgacag 359
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 caatttttttttt-aatttggtcataattacggcatttctagaagaatgtctgctgacag 228
Query: 360 gattgtgacctagtgcctcccgggcgg 386
|||||||||| ||||||||||||||||
Sbjct: 227 gattgtgacccagtgcctcccgggcgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 780
Length adjustment: 9
Effective length of query: 378
Effective length of database: 771
Effective search space: 291438
Effective search space used: 291438
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no133_e13.g1 MSMg01no133_e13.g1 CHROMAT_FILE:
MSMg01no133_e13.g1 PHD_FILE: MSMg01no133_e13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:04 2005
(356 letters)
>mm_chr13_55655443_55656198
Length = 756
Score = 688 bits (356), Expect = 0.0
Identities = 356/356 (100%)
Strand = Plus / Plus
Query: 1 cagaggcctgagagcttatgtgctgacaggaacgagctgggatcccagtcccctgagttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagaggcctgagagcttatgtgctgacaggaacgagctgggatcccagtcccctgagttc 260
Query: 61 ccatggcaggaagaggaggaggaagatgaggatgatgaagaggacgaggatgaatgagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccatggcaggaagaggaggaggaagatgaggatgatgaagaggacgaggatgaatgagag 320
Query: 121 tcacccccacaagactgtgatttgcaggatgtgtgtgacaaggagatctggaaaggagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcacccccacaagactgtgatttgcaggatgtgtgtgacaaggagatctggaaaggagaa 380
Query: 181 agaaaaaggctcatggtcaaacagtggggctgacctgctccgtcaggccttaggttatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaaaaaggctcatggtcaaacagtggggctgacctgctccgtcaggccttaggttatgg 440
Query: 241 ccaaagcacaatcagtgtgggccaagcactggtaaggactattgtgctcccagctgtgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccaaagcacaatcagtgtgggccaagcactggtaaggactattgtgctcccagctgtgtg 500
Query: 301 acagtgaacagtgggcagagcctagctctgaacatgggccatttgatagtgaagag 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acagtgaacagtgggcagagcctagctctgaacatgggccatttgatagtgaagag 556
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 356
Length of database: 756
Length adjustment: 9
Effective length of query: 347
Effective length of database: 747
Effective search space: 259209
Effective search space used: 259209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
