MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-134I16
Chromosome	13 (Build37)
Map Location	93,670,726 - 93,671,204
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Rasgrf2, Msh3, Dhfr, 6430502M16Rik, 4930405M20Rik, Zfyve16, LOC100039070, Spz1, Serinc5, Ppia-ps13_1124.1, Thbs4, EG624619
Downstream gene	EG218444, Papd4, LOC100039163, Homer1, Jmy, EG619883, Bhmt, Bhmt2, Dmgdh, Arsb
Link	Open Mouse BAC browser

Click to get alignment info.

name	Rasgrf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19418 MGI:109137
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Msh3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17686 MGI:109519
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dhfr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13361 MGI:94890
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	6430502M16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218440 MGI:2443245
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930405M20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73942 MGI:1921192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 25 ESTs, 2 Proteins

name	Zfyve16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218441 MGI:2145181
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039070 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039070
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 1 EST

name	Spz1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:79401 MGI:1930801
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Serinc5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218442 MGI:2444223
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppia-ps13_1124.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:382792
definition	note : peptidyl-prolyl cis-trans isomerase A pseudogene 13_1124.1 pseudo : _no_value

name	Thbs4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21828 MGI:1101779
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG624619 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624619 MGI:3647561
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	EG218444 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218444 MGI:3647983
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Papd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100715 MGI:2140950
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039163 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039163
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs, 24 Proteins pseudo : _no_value

name	Homer1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26556 MGI:1347345
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Jmy (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57748 MGI:1913096
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG619883 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:619883 MGI:3643032
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 545 ESTs, 7 Proteins

name	Bhmt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12116 MGI:1339972
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bhmt2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64918 MGI:1891379
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dmgdh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74129 MGI:1921379
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arsb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11881 MGI:88075
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rasgrf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7242198 GeneID:19418 MGI:109137
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAS protein-specific guanine nucleotide-releasing factor 2 transcript_id : NM_009027.2

name	Msh3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68299762 GeneID:17686 MGI:109519
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mutS homolog 3 (E. coli) transcript_id : NM_010829.2

name	Dhfr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68299777 GeneID:13361 MGI:94890
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dihydrofolate reductase transcript_id : NM_010049.3

name	6430502M16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803128 GeneID:218440 MGI:2443245
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6430502M16 gene transcript_id : NM_175455.3

name	4930405M20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264612 GeneID:73942 MGI:1921192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 25 ESTs, 2 Proteins product : RIKEN cDNA 4930405M20 gene transcript_id : XM_127489.6

name	Zfyve16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348417 GeneID:218441 MGI:2145181
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, FYVE domain containing 16 transcript_id : NM_173392.2

name	LOC100039070 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264614 GeneID:100039070
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 1 EST product : hypothetical protein LOC100039070 transcript_id : XM_001472197.1

name	Spz1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982611 GeneID:79401 MGI:1930801
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spermatogenic Zip 1 transcript_id : NM_030237.2

name	Serinc5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254229 GeneID:218442 MGI:2444223
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serine incorporator 5 transcript_id : NM_172588.2

name	Thbs4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142345557 GeneID:21828 MGI:1101779
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thrombospondin 4 transcript_id : NM_011582.2

name	Papd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129890 GeneID:100715 MGI:2140950
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PAP associated domain containing 4 transcript_id : NM_133905.2

name	Homer1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22550099 GeneID:26556 MGI:1347345
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homer homolog 1 (Drosophila) transcript_id : NM_147176.1

name	Homer1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754223 GeneID:26556 MGI:1347345
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homer homolog 1 (Drosophila) transcript_id : NM_011982.1

name	Homer1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:41281770 GeneID:26556 MGI:1347345
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homer homolog 1 (Drosophila) transcript_id : NM_152134.1

name	Jmy (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61098107 GeneID:57748 MGI:1913096
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : junction-mediating and regulatory protein transcript_id : NM_021310.2

name	EG619883 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264617 GeneID:619883 MGI:3643032
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 545 ESTs, 7 Proteins product : predicted gene, EG619883 transcript_id : XM_884704.3

name	Bhmt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:74325340 GeneID:12116 MGI:1339972
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : betaine-homocysteine methyltransferase transcript_id : NM_016668.3

name	Bhmt2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:12584973 GeneID:64918 MGI:1891379
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : betaine-homocysteine methyltransferase 2 transcript_id : NM_022884.1

name	Dmgdh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802611 GeneID:74129 MGI:1921379
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dimethylglycine dehydrogenase precursor transcript_id : NM_028772.2

name	Arsb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125656170 GeneID:11881 MGI:88075
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : arylsulfatase B transcript_id : NM_009712.3

name	Rasgrf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7242199 GeneID:19418 MGI:109137
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : guanine nucleotide releasing factor product : RAS protein-specific guanine nucleotide-releasing factor 2 protein_id : NP_033053.2

name	Msh3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:68299763 GeneID:17686 MGI:109519
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0019237 - centromeric DNA binding [Evidence IDA]; GO:0003684 - damaged DNA binding [Evidence IGI]; GO:0003677 - DNA binding [Evidence IGI] [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006259 - DNA metabolism [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006300 - long patch mismatch repair system [Evidence IMP]; GO:0006298 - mismatch repair [Evidence IGI]; GO:0006974 - response to DNA damage stimulus [Evidence IEA]; GO:0006299 - short patch mismatch repair system [Evidence IMP]; GO:0016446 - somatic hypermutation of immunoglobulin genes [Evidence IMP]; GO:0016447 - somatic recombination of immunoglobulin gene segments [Evidence IMP] codon_start : 1 product : mutS homolog 3 protein_id : NP_034959.2

name	Dhfr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7106289 CCDS:CCDS26680.1 GeneID:13361 MGI:94890
definition	GO_function : GO:0004146 - dihydrofolate reductase activity [Evidence IDA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006545 - glycine biosynthesis [Evidence IEA]; GO:0009165 - nucleotide biosynthesis [Evidence IEA]; GO:0006730 - one-carbon compound metabolism [Evidence IEA] codon_start : 1 product : dihydrofolate reductase protein_id : NP_034179.1

name	6430502M16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425186 CCDS:CCDS26681.1 GeneID:218440 MGI:2443245
definition	codon_start : 1 exception : mismatches in translation note : dendritic phosphoprotein 58 kDa product : cytosolic phosphoprotein DP58 protein_id : NP_780664.1

name	4930405M20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149264613 GeneID:73942 MGI:1921192
definition	codon_start : 1 product : hypothetical protein LOC73942 protein_id : XP_127489.5

name	Zfyve16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734996 CCDS:CCDS26682.1 GeneID:218441 MGI:2145181
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : zinc finger, FYVE domain containing 16 protein_id : NP_775568.1

name	LOC100039070 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264615 GeneID:100039070
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472247.1

name	Spz1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982612 CCDS:CCDS26683.1 GeneID:79401 MGI:1930801
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003700 - transcription factor activity [Evidence TAS] codon_start : 1 exception : mismatches in translation note : bhlh-zip transcription factor SPZ1 product : spermatogenic Zip 1 protein_id : NP_084513.2

name	Serinc5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369834 GeneID:218442 MGI:2444223
definition	GO_process : GO:0006658 - phosphatidylserine metabolism [Evidence ISS]; GO:0051347 - positive regulation of transferase activity [Evidence ISS] codon_start : 1 product : serine incorporator 5 protein_id : NP_766176.1

name	Thbs4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755781 CCDS:CCDS26684.1 GeneID:21828 MGI:1101779
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] codon_start : 1 product : thrombospondin 4 protein_id : NP_035712.1

name	Papd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527122 CCDS:CCDS26686.1 GeneID:100715 MGI:2140950
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : cytoplasmic poly(A) polymerase product : PAP associated domain containing 4 protein_id : NP_598666.1

name	Homer1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22550100 GeneID:26556 MGI:1347345
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007216 - metabotropic glutamate receptor signaling pathway [Evidence TAS] codon_start : 1 exception : mismatches in translation note : isoform L is encoded by transcript variant L; homer, neuronal immediate early gene, 1; immediate early gene protein Homer1A product : homer homolog 1 isoform L protein_id : NP_671705.1

name	Homer1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754224 CCDS:CCDS26687.1 GeneID:26556 MGI:1347345
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007216 - metabotropic glutamate receptor signaling pathway [Evidence TAS] codon_start : 1 note : isoform S is encoded by transcript variant S; homer, neuronal immediate early gene, 1; immediate early gene protein Homer1A product : homer homolog 1 isoform S protein_id : NP_036112.1

name	Homer1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41281771 GeneID:26556 MGI:1347345
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007216 - metabotropic glutamate receptor signaling pathway [Evidence TAS] codon_start : 1 note : isoform d is encoded by transcript variant d; homer, neuronal immediate early gene, 1; immediate early gene protein Homer1A product : homer homolog 1 isoform d protein_id : NP_687036.1

name	Jmy (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61098108 CCDS:CCDS26688.1 GeneID:57748 MGI:1913096
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence IEA]; GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI]; GO:0005198 - structural molecule activity [Evidence IEA]; GO:0003713 - transcription coactivator activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007050 - cell cycle arrest [Evidence IDA]; GO:0006917 - induction of apoptosis [Evidence IDA]; GO:0051091 - positive regulation of transcription factor activity [Evidence IDA]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0043620 - regulation of transcription in response to stress [Evidence TAS] codon_start : 1 note : p300 transcriptional cofactor JMY product : junction-mediating and regulatory protein protein_id : NP_067285.2

name	EG619883 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82951989 GeneID:619883 MGI:3643032
definition	codon_start : 1 product : similar to ribosomal protein L30 protein_id : XP_889797.1

name	Bhmt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7709990 GeneID:12116 MGI:1339972
definition	EC_number : 2.1.1.5 GO_function : GO:0047150 - betaine-homocysteine S-methyltransferase activity [Evidence ISS] [Evidence IEA]; GO:0008898 - homocysteine S-methyltransferase activity [Evidence ISS] [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0009086 - methionine biosynthesis [Evidence IDA]; GO:0006479 - protein amino acid methylation [Evidence ISS]; GO:0050666 - regulation of homocysteine metabolism [Evidence ISS] codon_start : 1 product : betaine-homocysteine methyltransferase protein_id : NP_057877.1

name	Bhmt2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12584974 CCDS:CCDS26689.1 GeneID:64918 MGI:1891379
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0008898 - homocysteine S-methyltransferase activity [Evidence ISS] [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0009086 - methionine biosynthesis [Evidence ISS] codon_start : 1 exception : mismatches in translation product : betaine-homocysteine methyltransferase 2 protein_id : NP_075022.1

name	Dmgdh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21311901 CCDS:CCDS26690.1 GeneID:74129 MGI:1921379
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0004047 - aminomethyltransferase activity [Evidence IEA]; GO:0047865 - dimethylglycine dehydrogenase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006546 - glycine catabolism [Evidence IEA] codon_start : 1 product : dimethylglycine dehydrogenase precursor protein_id : NP_083048.1

name	Arsb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125656171 GeneID:11881 MGI:88075
definition	GO_component : GO:0005764 - lysosome [Evidence IEA] GO_function : GO:0004065 - arylsulfatase activity [Evidence IDA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003943 - N-acetylgalactosamine-4-sulfatase activity [Evidence IEA]; GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : arylsulfatase B structural; arylsulfatase B regulation; arylsulfatase B temporal regulation; arylsulfatase B complex product : arylsulfatase B protein_id : NP_033842.3

name	EG624619 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624619
definition	number : 1 pseudo : _no_value

name	EG624619 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624619
definition	number : 2 pseudo : _no_value

name	EG624619 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624619
definition	number : 3 pseudo : _no_value

name	EG624619 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624619
definition	number : 4 pseudo : _no_value

name	EG624619 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624619
definition	number : 5 pseudo : _no_value

name	EG624619 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624619
definition	number : 6 pseudo : _no_value

name	EG624619 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624619
definition	number : 7 pseudo : _no_value

name	EG624619 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624619
definition	number : 8 pseudo : _no_value

name	EG624619 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624619
definition	number : 9 pseudo : _no_value

name	EG624619 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624619
definition	number : 10 pseudo : _no_value

name	EG218444 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149264611 GeneID:218444 MGI:3647983
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG218444 transcript_id : XR_035093.1

name	LOC100039163 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264616 GeneID:100039163
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs, 24 Proteins product : similar to glyceraldehyde-3-phosphate-dehydrogenase pseudo : _no_value transcript_id : XR_030703.1

clone name	MSMg01-369A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520D14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-232P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404F18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-079L01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-435M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374K19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-143J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333J01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-263O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323I18
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-134I16.T7 (MSMg01no134_i16.b1)	MSMg01-134I16.TJ (MSMg01no134_i16.g1)
ACC	AG341231	AG341232
length	1,214	1,230
length of high quality (start - end)	257 (458 - 714)	484 (76 - 559)
definition	CHROMAT_FILE: MSMg01no134_i16.b1 PHD_FILE: MSMg01no134_i16.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:50:02 2005	CHROMAT_FILE: MSMg01no134_i16.g1 PHD_FILE: MSMg01no134_i16.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:50:03 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	NCCGTGTTTGGGNAAACATTGGCGCTATAGACTACTAAGGGAGAGGATCC GCGGAATTCTTTGTTTAGCTCTGTTGTCCAGGGTTCCCAGGGNNANNNGA NNCNCNGGAGNCNACCTTTAAAAAGTTCTNNGNANANANNAGANANNAGN TNNNNANNGGAGGNAGGANGGGNAAAGAANNNNNNNCACCCNGNNGGNNG CAGNCAGNNNNGNCCAANNAAAANGGNCCNNGGCCNNNAAGAAGCNNNGC AANNNCAGGAGGNCCCACNGGNAGAANCNNGGANCNNAGAGCANAAGCCA NGGGGGGGCGGNNCAGAAACNNNNCCCCCGTTCTATGNANCCAAGACNNN CCCCCACNNNCGGNNCNANAGANNCAGGGNANCGGGNNNNANGNGGAGGT TTTTTTTTTACTNAGACNNGAGCTNNGNGGAGACAGAAACGAAGGGACCA ACTTGCATTCTTCTACATGTTGACCACTAGTTGAACCAGCTCCATTTGTT GAAAATGCTGTCTTTTTTTTTTTTTCCACTGAATGGTTTTAGCTCCTTTG TCAAAGATCAAGGGACTGTAGGTGTGGGGGTTCATTTCTGGGNCTTTAAT TCTATTCCATTGATCTACCTGCCTGTCACTGTACCAATACCATACAGTTT TATCACTATTGCTCTGTAGAACAGCTTGAAGNCTGGGATGCTGATTCCCC AAGAAGTTCTTTTAATGAAGAGAAAAGTTTTCACAATCCTGGGTTTTTTT GGNAANCCAAAGGAATTTTTTTTTTTTTTTTTNGAAANNNNAGGAAAAAG GGAGNGGGAAGNNTGGAGGGAANGGGAATGAANNAGGAAAAAGAAGAGGT TATTTAGGTGAGTAGGAAAAAAAAGAAGGGAGGAAATGGGGGAGGATGAA AAAAAAAAAAAANGGGAGAAGAGAANAAGGAGGAGGGAGGAAAAGAGNAG AGAGGGGAGAGAGAAGAGGGAAAAAGGGGAGTGGAATGGAAAAAAGAAAG AAGNNNAAAGANGGAGAGAAATAATAGTGGGTGGAAGGGTTAAGGAAAAA TAGGTGGAAAAATGGAGAGAAGAAGTAAAGGAAAAGAATATAAGATGAGA TGAAGGAAGGGAGGATAAATAGTGTAGGTGAGAGNGAGGAGTGGGGGGTG AGGATAANATTGAAGAGGNGAGGAATNAAAGTATAAAAGATGTAGAAGAG GGAGAGAGTATAAA	CGAGTCTTTTTTTAAGATGTGAGNCXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXCTTTAAAGGCATATTGAATGGGTTC TAACAGCGTCTGTGCCCCATTGCTTTAAAGCACACGACACAAATGTGACA AGATGTTACGATTTGATTAAGCCCTGTGTGAGTCCACAGGCCAGAAGAAA GGTAGAGAGCAGAAAAGAATCAGTTTCTTGCCAGGAAGCAAGAAAGGCTG AATATGATGGTGCATGCCTGCTATTCCCACAGTCTGGGGTCAGAGGCAGG AGGACCGTGAGCTTGAGGTGGGTTTTAGACCGCTTGGGCTGCATAATGTG ACCCTGTCTCAAAAAACAAAGTGTGTGTGGGGTGATGGTGGGATCCATCT AGGTTCATTTGTCTACTGCTTTATGTCAACTAATATTTAGTAGGCACTAT AGGTGCTATATAGAAATTAAGACACCCACCTTTTTTAGAGAAGGCTTTAG AAGCAGGTTTGGAAAAGGTCAGAAAAAGCTGTTGCCTGTATGTGGGATAT GTTGGTTTATCTGCCCTGACTTGTCTGGCCTAATCTTGATATGATGCGTC TAGCCTTTGCAATAGTTGTTGTGCTGTTTTTTTCTCTTTTTCAGTCCTTT CCTCCTCTCACTTTTCTCTTCTCTTCCTTCTTTCTTTCTTTCTTCTTCTT TATCTTTTTTCTTTTCTTTTTCTTTCATTTTTTTTTTTTCTTTTCTTTTT CTTTTATTTTTTTCTTCCCTTTCCCTCTTTTTTTTTTCTTATCTTTTCCC CCTTTCCCTCTTTCTATTTCTCCTTCCTTTCTCTTTTTCTTCCATTTTTT TTTTCTCTATTTTTTTCTCCTTTTTTCCTTTTTTTTCTTTTTTTTTCTTC TTTTTTTTTCTCTTCTTTCCTTTTTTTCTTTTTTTCTTCCTTTTTTCTTC TTTTCTATTTTTTTCCTTTTTTCTTTTCTCCCTCTTTTCTTTCTCTTTTT TTCATCCTCTTCTTTTCTTTTTCCCTCTTTCTCTCTCTCTTCTTTTTTTC CTTTTTTCTTTCTCTTCTTATCTTCATTTTTTTCTTTTTTTTCATATTTT TCTTCTTTCTTTCACTCTTCTTTCTTTTTTTTCTTTTGTTAATTTTCTTT TTTTTTTTTACTTCCCCATTCTACTCTTCTTCTTATTTTTCTATATCTTT CTTTTTCATTTTTCTTCTTTTCTTTTTCTC
quality values	Open. Hide. 0 3 6 6 6 6 6 8 8 8 8 3 0 3 8 3 6 6 6 8 6 8 10 8 8 8 8 8 8 8 15 10 10 8 10 8 8 8 19 21 30 28 28 28 28 33 28 33 33 33 34 39 39 39 37 37 39 39 39 37 33 33 33 31 31 31 33 33 30 23 19 8 3 6 3 3 3 6 6 6 6 6 6 6 6 6 8 9 12 12 23 3 0 0 3 0 0 0 3 3 0 0 3 0 3 0 3 23 23 3 0 3 0 3 9 12 12 12 10 10 10 10 10 9 10 10 13 10 3 0 0 3 0 3 0 3 0 3 0 0 3 25 3 0 3 0 0 3 3 0 3 0 0 0 0 3 0 0 3 14 7 7 3 0 3 29 18 3 0 3 7 3 0 3 29 14 7 7 3 0 0 0 0 0 0 0 3 12 10 10 3 0 3 0 0 3 3 0 0 3 27 27 3 0 3 29 3 0 0 0 0 3 0 3 7 7 3 0 0 3 29 18 3 0 3 3 0 3 3 0 0 3 7 7 3 0 0 0 3 29 29 59 29 29 3 0 0 0 3 27 29 3 0 0 0 3 7 7 9 7 14 3 0 3 27 27 17 3 0 3 3 0 3 7 7 3 0 3 0 0 3 7 3 0 3 0 0 3 29 29 29 29 3 0 3 29 27 27 17 3 0 3 7 7 9 9 9 9 7 7 3 0 0 3 25 25 47 29 29 3 0 0 0 0 3 29 29 24 18 8 8 6 6 6 18 18 3 0 3 0 3 27 27 44 27 27 3 0 0 0 3 29 29 59 27 27 3 0 0 0 3 7 3 0 0 3 0 3 0 3 18 3 0 0 3 14 7 7 3 0 3 0 3 7 7 3 0 0 0 0 3 0 3 0 3 27 29 12 12 14 24 21 19 19 19 14 10 8 9 11 14 3 0 3 25 25 3 0 0 3 27 27 27 3 0 0 3 0 3 23 23 41 41 59 19 9 9 9 9 14 18 16 9 9 6 6 8 13 11 11 11 11 9 18 9 11 11 12 27 30 41 46 46 37 37 37 37 43 57 57 57 57 59 59 57 57 57 57 57 57 57 57 57 59 59 59 43 40 28 20 20 31 31 35 43 40 47 59 59 68 68 68 68 68 68 68 68 68 59 59 57 57 59 59 59 68 68 68 68 68 68 68 68 59 59 48 42 42 35 35 42 44 37 32 32 44 44 44 42 47 39 42 59 57 54 44 48 44 44 30 44 44 59 44 43 43 43 43 43 26 29 11 11 11 16 16 18 15 28 34 43 23 23 15 21 14 14 14 33 33 53 53 50 50 50 41 41 36 33 22 27 3 0 3 27 23 41 41 47 39 39 35 35 35 59 59 59 59 59 39 39 39 39 59 43 43 37 43 32 32 30 40 21 20 11 21 21 21 12 12 16 23 23 42 30 30 28 28 23 41 41 48 41 37 28 28 28 34 34 47 47 59 37 35 32 29 24 27 30 30 12 21 11 24 24 18 23 26 32 32 37 32 41 24 24 11 25 25 23 25 3 0 3 19 13 27 32 31 34 18 21 12 23 12 12 12 24 28 44 39 39 35 36 26 30 28 23 23 34 34 24 22 15 9 8 8 10 10 12 17 22 23 14 12 12 15 23 24 30 31 29 23 18 9 9 9 27 23 20 21 14 13 15 14 9 9 9 10 14 7 7 3 0 3 3 0 3 15 19 22 10 10 12 17 17 17 19 15 16 34 15 17 8 8 8 19 17 22 10 8 8 3 0 3 8 8 3 0 0 0 0 3 8 8 8 8 10 10 15 13 9 8 13 3 0 3 11 14 16 13 3 0 0 3 8 8 8 8 8 11 13 3 0 3 10 13 21 19 33 17 18 3 0 0 3 7 7 7 10 8 9 9 9 12 17 17 10 11 10 13 8 8 8 8 8 8 8 6 8 8 8 8 8 6 6 6 8 10 13 13 34 19 15 8 8 8 8 8 8 8 7 7 8 9 11 17 12 9 15 9 9 9 8 8 6 6 8 8 10 12 12 10 10 8 8 8 14 14 8 8 8 3 0 3 11 11 8 8 8 8 6 6 8 8 3 0 3 17 10 10 8 8 6 6 8 8 11 6 6 8 8 8 8 15 10 8 3 0 3 8 8 8 8 8 8 9 12 12 19 19 19 10 7 6 6 6 10 8 8 8 8 8 8 8 8 10 19 10 8 8 8 7 10 8 7 7 8 8 10 11 12 13 9 8 8 6 6 15 6 6 8 8 3 0 0 0 3 8 8 6 3 0 3 8 8 8 8 8 6 6 7 7 9 10 10 10 8 8 8 8 8 8 8 9 10 11 11 8 10 7 8 14 8 10 23 17 19 19 22 15 15 8 8 8 10 8 8 12 17 18 17 17 8 8 15 19 8 8 8 8 15 10 9 8 8 13 15 15 13 8 8 6 6 11 8 10 8 10 10 8 8 8 12 11 11 8 8 8 10 12 12 11 9 8 8 8 8 8 9 9 9 10 8 8 6 7 7 7 7 8 8 6 6 8 6 7 9 19 8 8 8 8 6 3 0 3 6 8 8 8 9 9 9 11 9 9 8 8 8 8 8 8 6 6 6 6 3 0 3 6 7 6 6 8 15 17 13 3 0 3 18 19 19 10 8 3 0 3 13 8 8 8 8 11 13 16 15 10 6 6 8 8 8 8 8 8 9 9 19 9 9 9 9 9 8 8 6 6 8 8 8 8 8 7	Open. Hide. 6 6 6 6 6 7 7 10 8 9 21 21 19 9 6 6 6 6 6 6 6 6 3 0 3 7 7 11 8 8 8 11 8 7 9 9 12 12 19 23 23 25 30 30 30 31 29 29 22 23 25 28 32 35 37 37 37 37 35 30 36 36 36 36 36 50 50 50 50 47 43 27 17 9 9 9 11 11 11 10 12 17 24 26 24 30 30 37 33 33 36 36 38 53 53 53 53 53 42 42 53 53 53 53 53 41 33 33 30 28 25 21 13 10 10 10 11 11 13 13 27 27 33 31 31 31 37 37 27 30 16 10 10 10 10 10 15 29 43 59 50 50 50 50 50 50 57 57 57 57 57 57 59 59 53 53 53 53 50 50 57 53 53 68 68 47 47 47 51 50 50 68 68 50 50 50 50 50 50 50 50 53 53 68 53 57 57 57 57 54 57 57 57 59 68 68 68 59 59 59 68 59 59 59 59 68 68 68 68 68 68 68 68 68 68 59 59 59 68 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 68 68 68 68 68 59 59 59 59 59 57 57 57 57 57 57 62 62 62 62 62 62 62 62 68 68 68 62 62 62 62 62 62 62 68 68 68 62 62 62 68 68 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 59 59 52 38 38 18 13 17 18 38 41 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 68 59 59 59 59 57 57 57 57 57 57 59 59 59 59 57 59 59 59 59 59 50 43 43 43 43 43 52 59 59 68 59 59 54 54 54 59 59 57 59 57 57 57 44 44 35 39 50 43 44 43 44 50 59 59 68 59 59 59 54 47 57 40 42 37 37 42 47 32 57 44 36 36 33 36 43 43 43 43 44 42 44 37 37 37 39 39 48 42 44 27 27 17 30 30 47 43 43 46 43 43 43 47 47 59 48 48 43 43 42 35 35 40 39 30 39 33 36 39 43 37 48 48 39 39 30 30 24 21 19 10 10 10 13 9 9 8 8 8 8 11 13 30 30 19 17 13 13 11 11 11 12 10 8 8 8 8 10 8 8 8 10 13 8 10 6 7 8 8 8 8 8 13 8 8 9 9 11 8 8 8 8 8 8 11 8 8 8 8 7 7 8 8 8 10 9 9 10 11 12 12 12 9 9 10 9 8 8 8 9 12 13 11 8 8 10 8 6 9 10 10 9 9 9 9 9 9 13 12 12 10 10 9 10 12 10 10 8 8 6 6 8 6 6 10 12 8 9 9 9 9 10 13 11 11 11 10 9 9 9 8 8 8 8 8 8 10 8 8 9 9 8 8 8 7 7 8 10 10 8 13 6 9 10 10 10 10 10 10 16 8 8 6 6 8 10 8 9 9 9 17 17 14 14 9 9 9 10 8 10 8 10 10 10 8 8 12 12 15 12 13 9 7 10 8 10 8 8 8 8 8 8 8 8 7 7 12 10 10 8 6 6 11 6 6 8 8 8 8 10 17 30 18 16 18 18 14 13 12 11 8 8 7 9 9 9 16 13 13 10 10 8 8 6 7 8 6 8 8 8 9 9 8 8 8 8 8 8 10 9 10 10 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 9 10 11 10 10 10 10 10 10 12 9 9 10 10 8 8 8 8 8 9 9 13 8 8 8 6 7 8 6 6 8 8 10 10 10 8 8 8 6 6 8 8 10 10 8 10 7 7 8 8 10 9 8 8 8 8 8 8 8 10 8 8 8 8 9 10 10 13 15 10 8 8 8 8 8 8 8 8 8 8 8 8 8 10 9 8 8 11 13 13 11 13 18 8 8 6 7 8 8 8 13 15 11 10 14 14 11 8 12 7 7 8 15 12 8 8 8 8 9 9 13 12 11 11 8 8 9 9 10 10 10 10 10 8 8 6 6 8 8 8 8 8 8 8 6 6 8 8 12 10 10 8 10 10 8 9 9 9 9 9 9 13 17 8 8 8 7 8 9 9 11 9 9 10 15 8 8 6 6 10 8 17 11 8 8 11 10 10 8 12 10 10 9 15 9 9 9 10 12 16 10 10 7 6 8 6 9 8 11 6 6 6 6 11 12 12 11 12 9 9 11 8 15 11 19 11 10 8 8 8 6 6 8 8 10 8 9 9 9 9 10 10 8 8 8 10 10 11 16 16 14 10 10 9 6 8 8 8 11 13 10 10 7 7 10 8 9 6 6 10 8 8 8 9 9 8 8 8 10 8 8 8 9 11 11 12 10 10 11 11 10 16 15 15 15 15 11 9 7 8 7 7 8 8 13 11 11 12 12 15 12 12 11 11 12 21 21 19 17 11 11 8 10 8 8 8 8 10 8 8 8 8 8 8 8 8 10 12 10 10 10 10 10 8 8 7 8 11 8 8 8 8 8 8 11 12 9 11 12 9 9 9 9 10 12 18 10 9 9 8 11 8 10 10 10 14 14 14 14 8 12 10 8 8 8 10 12 9 10 12 10

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no134_i16.g1 MSMg01no134_i16.g1 CHROMAT_FILE:
MSMg01no134_i16.g1 PHD_FILE: MSMg01no134_i16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:50:03 2005
         (484 letters)



>mm_chr13_93670521_93671404
          Length = 884

 Score =  810 bits (419), Expect = 0.0
 Identities = 464/479 (96%)
 Strand = Plus / Plus

                                                                       
Query: 6   aaggcatattgaatgggttctaacagcgtctgtgccccattgctttaaagcacacgacac 65
           |||||||||||||||| |||||||||||||||||   ||| ||||||||||| | |||||
Sbjct: 206 aaggcatattgaatggattctaacagcgtctgtgtttcatcgctttaaagcataggacac 265

                                                                       
Query: 66  aaatgtgacaagatgttacgatttgattaagccctgtgtgagtccacaggccagaagaaa 125
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 266 aaatgtgacaagatgttacgatttgattaagcgctgtgtgagtccacaggccagaagaaa 325

                                                                       
Query: 126 ggtagagagcagaaaagaatcagtttcttgccaggaagcaagaaaggctgaatatgatgg 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ggtagagagcagaaaagaatcagtttcttgccaggaagcaagaaaggctgaatatgatgg 385

                                                                       
Query: 186 tgcatgcctgctattcccacagtctggggtcagaggcaggaggaccgtgagcttgaggtg 245
           ||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 386 tgcatgcctgctaatcccacagtccggggtcagaggcaggaggactgtgagcttgaggtg 445

                                                                       
Query: 246 ggttttagaccgcttgggctgcataatgtgaccctgtctcaaaaaacaaagtgtgtgtgg 305
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ggttttagacagcttgggctgcataatgtgaccctgtctcaaaaaacaaagtgtgtgtgg 505

                                                                       
Query: 306 ggtgatggtgggatccatctaggttcatttgtctactgctttatgtcaactaatatttag 365
           |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 506 ggtgatggtgggatccatctaggttcatttgtctactgttttatgtcaactaatgtttag 565

                                                                       
Query: 366 taggcactataggtgctatatagaaattaagacacccaccttttttagagaaggctttag 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 taggcactataggtgctatatagaaattaagacacccaccttttttagagaaggctttag 625

                                                                      
Query: 426 aagcaggtttggaaaaggtcagaaaaagctgttgcctgtatgtgggatatgttggttta 484
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 626 aagcaggtttggaaaaggtcagaaaaagctgttgcctgtatgtgggatatgttgtttta 684


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space:   414276
Effective search space used:   414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information