CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCTAAATGTAATCGAAAGTGTCATGTTTAAGGAGCTATTTTGGAGAC
AGGGTTTCTCTGAGTAGCCCTGACTGTTTTGGAACTTACTCTGTAGACCA
GGCTGGCCTCGAACTTAGAAATCCGCCTGCCTCTGCCTCCCAAGTGCTGG
GATTAAAGGCGTGCGCCACCACTTTTTGTTACTTTAGGTCATGGAAATGA
AGAGATCAGCATACAGTTACTGATTTATATTGTTTAGTAGCACGTCAAAG
TATATTTATCATAATGTTTATGTAATACAACAAAAACTTGGAAAGGTTTA
AAACTTTAGTGTAACAGTTTTGAGTCACATCTACCCTTTGTATTTCCAAT
ACCTCTATTCTTTTTTTTTAAAGATTTATTTATTTATTATATGTAAGTAC
ACTGTAGCTGTCTTCAGACACTCCAGAAGAGGGCATCAGATCTTGTTACA
GATGGTTGTGAGTCACCATGTGGTTGCTGGGATTTGAACTCCGGACCTTC
GGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCCCC
CCCCCCAATATCTCTATTCTTACTTTTTAACAGTTTCTTGGTAGGTGGTT
AGTGTTTGTTCTACTCTAATAACACATTTTAATTTCCATTTTCTCATTTT
GAAAAAAGGGCTTGCTATGTGATCAGACAAGACTGGAAATCTTTTG

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTTTCTTTTCTTTTTTGGGGGGATATTTTTTTATTT
ACATTTCAAATGCTTTCCCCTTTCCAGGTCTCCCCTTAGGAAACCCCCTC
TCCCATCCTCCTTCCCCCTGCCTCTTTGAAGGTGCTCCCCCATCCATCCA
TGCCCATCATCCCACCCTGACATTCCCCAACACTGGGGCATCGAACACCC
TCAGGCCCAAGGGTCTCTCCTCCCACTGATATCCAACAAGGCTATCCTCT
GCCACATATGTGGCCAGAACCATAGGTCCCTCTATGTGTATTCTTTGGTT
GGTGGTCCAGTCCCCTGGAGCTCCAGGGGGGTCTGGCCTGTTGACACTGT
TGCTCCCTCCATGGGGCTGCAAACCCCCTCAGCTCCTTCAGTCCCTTCTC
CAACTCCTCTATTGGGAACCCCTGAGCTCAATCCAATGGTTGCCTGAGAG
CTTGACCTCTGTATTTGTCAGGCTCTGGCAGAGCCTCTCAGGAGACAGCC
ACATCAGGCTTCCATCAGCAAGCACTTTGCAGCATCCACAATAATGTCCA
GGTTTGGTGACTGTATATAGGATGGCTCCTCAGGTGTGGCTGTCTCTGCA
TGGTCTTTCCTTCAGCCTCGGCTCAAACCTTGTCTCATAATTTCTCCTGT
GAATAATTCGCTTCCCCTTT

Query= MSMg01no135_h09.b1 MSMg01no135_h09.b1 CHROMAT_FILE:
MSMg01no135_h09.b1 PHD_FILE: MSMg01no135_h09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:36 2005
         (617 letters)



>mm_chr13_112217001_112218017
          Length = 1017

 Score = 1114 bits (576), Expect = 0.0
 Identities = 612/638 (95%), Gaps = 25/638 (3%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcctaaatgtaatcgaaagtgtcatgtttaaggagctattttggagacagggttt 63
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 ggaattcctaaatgtaat-gaaagtgtcatgtttaaggagctattttggagacagggttt 755

                                                                       
Query: 64  ctctgagtagccctgactgttttggaacttactctgtagaccaggctggcctcgaactta 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 ctctgagtagccctgactgttttggaacttactctgtagaccaggctggcctcgaactta 695

                                                                       
Query: 124 gaaatccgcctgcctctgcctcccaagtgctgggattaaaggcgtgcgccaccacttttt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 gaaatccgcctgcctctgcctcccaagtgctgggattaaaggcgtgcgccaccacttttt 635

                                                                       
Query: 184 gttactttaggtcatggaaatgaagagatcagcatacagttactg-----attta----- 233
           |||||||||||||||||||||||||||||||||||||||||||||     |||||     
Sbjct: 634 gttactttaggtcatggaaatgaagagatcagcatacagttactgttattatttacatat 575

                                                                       
Query: 234 -----------tattgtttagtagcacgtcaaagtatatttatcataatgtttatgtaat 282
                      |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tagcatacagttattgtttagtagcacgtcaaagtatatttatcataatgtttatgtaat 515

                                                                       
Query: 283 acaacaaaaacttggaaaggtttaaaactttagtgtaacagttttgagtcacatctaccc 342
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 acaacaaaaacttggaaaggtttaaaactttagtgtaacagttttgagtcacatctaccc 455

                                                                       
Query: 343 tttgtatttccaatacctctattctttttttttaaagatttatttatttattatatgtaa 402
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 454 tttgtatttccaatacctctattcttttttttaaaagatttatttatttattatatgtaa 395

                                                                       
Query: 403 gtacactgtagctgtcttcagacactccagaagagggcatcagatcttgttacagatggt 462
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gtacactgtagctgtcttcagacactccagaagagggcatcagatcttgttacagatggt 335

                                                                       
Query: 463 tgtgagtcaccatgtggttgctgggatttgaactccggaccttcggaagagcagtcgggt 522
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtgagtcaccatgtggttgctgggatttgaactccggaccttcggaagagcagtcgggt 275

                                                                       
Query: 523 gctcttacccactgagccatctcaccag---ccccccccccccaatatctctattcttac 579
           ||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||
Sbjct: 274 gctcttacccactgagccatctcaccagcccccccccccccccaatatctctattcttac 215

                                                 
Query: 580 tttttaacagtttcttggtaggtggttagtgtttgttc 617
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 214 tttttaacagtttcttggtaggtggttagtgtttgttc 177


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space:   611249
Effective search space used:   611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)