NCAGTTTTGNTCATCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXTTCA
GAGGACCGCGGAATTCTGTCGAAATGGGGAGGAAGTATTTTGGGAGCCAC
AGGAATCAATGACATACAAATACAAAAAAAAAAAAAAACAGAAAACAAAC
AAACACACCCTGCAGAATCAACTTACCGGGGCCCATAAGGGTTCACAGAG
ACTGAACTACCAGAAAGAATACACAGGACTGACCTAGGCCCTCTGCACAT
ATGTGACAGTTGTGTAGCTAGGTATTCTCCTAAACCAGTAGTTGTCTGTG
ACTCTGTTGTTGCCTGGCTTTAGGACTCTTTCCCCTACTAGGATGCCTTG
TCTGACCTCAATATGAGAAGATGCCCCTATCATACTGGAATTTGATATAA
CCAGTGGAGTTAATATCCATTAAATTCCCACCATGGGTTAGTTGGCATGG
TAAATAAACCCTTAGCGTGGCTGGGGCTAATCTGTGTGCTGGTCTCTAGG
ACTGACTATAAAAGGAAACAAAGCAAGAGCACCAATTGTTTTCTCAGGTT
CCTGGCTCTTGGGGAAATGTGAGCTGCTGCCTGATTTTGCCTCCCTAATG
CCATGTAATATGACCAACACTTAATAAACAAACCAACCGCGCTATCGACC
TTCCTTTCTTTAAACTTTCCTGTCATCAGGCTCC

CAAACTAAATTTCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAA
TACCGAATGGCTGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCAT
CAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCA
GAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGTGAGGATGT
GGAGAAAGAGGAACACTCCTCAATTGCTGGTGGGATTGCAAGCTTGTACA
ACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATGGTAC
TACTGGAGGATCCCACAATACCTCTCCTGGGTATATATCCAGAAGATGTT
CCAACCGTTAAGAAGGACACATGCTCCACTACGCCCACAGCAGCCTTATT
TATAATAGTCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAGT
GGATACAAAAAATGTGGTACATTTACACAATGGAGTACTACTCAGCTATT
AAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGGACCTGGAAGG
CATCATCTTGAGTGAGGTAACCCAATCTCAAAAGAATTCACACAATATGT
ACTCACTGATAGGTGGATATTAGCGCAAAAACTTAA

Query= MSMg01no136_i02.b1 MSMg01no136_i02.b1 CHROMAT_FILE:
MSMg01no136_i02.b1 PHD_FILE: MSMg01no136_i02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:55 2005
         (508 letters)



>mm_chr13_116903754_116904661
          Length = 908

 Score =  878 bits (454), Expect = 0.0
 Identities = 495/514 (96%), Gaps = 11/514 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   ggaattctgtcg-aaatggggaggaagtattttgggagccacaggaatcaatgac-atac 62
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 194 ggaattctgtcgaaaatggggaggaagtattttgggagccacaggaatcaatgacaatac 253

                                                                       
Query: 63  aaatacaaaaaaaaaaa---------aaaacagaaaacaaacaaacacaccctgcagaat 113
           |||||||||||||||||         |||| |||||||||||||||||||||||||||||
Sbjct: 254 aaatacaaaaaaaaaaaaaaagaaagaaaaaagaaaacaaacaaacacaccctgcagaat 313

                                                                       
Query: 114 caacttaccggggcccataagggttcacagagactgaactaccagaaagaatacacagga 173
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 caacttaccggggcccataagggttcacagagactgaactaccagaaagaatacacagga 373

                                                                       
Query: 174 ctgacctaggccctctgcacatatgtgacagttgtgtagctaggtattctcctaaaccag 233
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ctgacctaggccctctgcacatatgtgacagttgtgtagctaggtattctcctaaaccag 433

                                                                       
Query: 234 tagttgtctgtgactctgttgttgcctggctttaggactctttcccctactaggatgcct 293
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tagttgtctgtgactctgttgttgcctggctttaggactctttcccctactaggatgcct 493

                                                                       
Query: 294 tgtctgacctcaatatgagaagatgcccctatcatactggaatttgatataaccagtgga 353
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 494 tgtctgacctcaatatgagaagatgcccctatcatactgcaatttgatataaccagtgga 553

                                                                       
Query: 354 gttaatatccattaaattcccaccatgggttagttggcatggtaaataaacccttagcgt 413
           |||||||||||||||||| | | ||||||||| ||||||||||||||| |||||||| ||
Sbjct: 554 gttaatatccattaaatttctagcatgggttaattggcatggtaaatacacccttagtgt 613

                                                                       
Query: 414 ggctggggctaatctgtgtgctggtctctaggactgactataaaaggaaacaaagcaaga 473
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ggctggggctaatctgtgtgctggtctctaggactgactataaaaggaaacaaagcaaga 673

                                             
Query: 474 gcaccaattgttttctcaggttcctggctcttgg 507
           ||||||||||||||||||||||||||||||||||
Sbjct: 674 gcaccaattgttttctcaggttcctggctcttgg 707


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space:   447204
Effective search space used:   447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)