CCCCCATANTCCTTCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXCGCGGAATTCTCAAAGGTACCTTCAAACATGTCCATACGTACC
AGGGCTACAACTGCCCTGGATTGTCACCATCCTCCGTGGTTTGGCTCAGA
GCAGGAAGGAACAGCATCTATCCTCTGCAAACCCACAGTTGGAGGGTCTG
GAAACCCTACTACTTAAACCTTCTCATTTCTGCAGGCGCCCACTGGGCTG
ACCTGGCGACAGGCTTGGGTGATAGTGACTGTGATAACTTGGTATCTCTT
CTCCGAATGTTACAGCTGCTATTGCATCACCCCCTTTCGTCTGGCTCTTT
CTTCCCTTAGGACAACTGACTAATCATCTCGGTTCTAGGAACTTATTCTT
AGGAAACAACCAGATGCCTAGCCAAAGCTACGCATGCGGAATCAATTACA
GAGCTCTTTATAATGGTAAAAGAAAAATTCTAAGTTTCGATCAGTAGGAG
GCTGGTTAAATTAATAACAATTCATTCATTTTAAGAAAATATGTAACCAT
TTAAATGGTGACGTAGACCTGCATTTATTTACATGGAAAGACATCCATGA
TACACTGTAATGGGGAAAGTGTATGAACTCACTTTTGTAACAATATAAGT
TAATATGTGAGCTCACAAGAGTGTACGTATGCTAAA

CGCCCGAANCTCCGATGCTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGCCTGCTGCGTCCT
CTTCTGGCTGGGATTGCTATAAAAATGCAACCGACTAAGTGACTTATGGC
AGAGAAGGTTTTGGAACATGAGTAGCCCAGGATGAAAGGTGCCATGGGGT
TTGGTGTTTATTGAAAGTTTTTTTCCTGATTTTGTGTGCTGTGTCCTTGC
ATGGTAGAAGGGCTGTGAGGTTTTCTCTCCTGGGCCCCTGTGATAAGGGC
ACTGTCCCATCCTTGTAACTTAACTATTTTTGGCAGCTTCTCCTATCACT
ATCTAGGATAGGAAGGTTAGTCACCTTCGCCCTCAAGTATGGTCTTCCTT
ACATAGTCCCTTTTTCTTTGTGTACTCCCCCCTTTTTTTATGTAGACTCT
TTGCATCTGTGTCCCTTTCACAACCTTGTTTGATTGGTACTCTATCTCTT
CCTGTTTTCTTTTTGTCCTTTCCCGTGTCTGTATTGTTTTCTTGCTCCAT
TCGCCTTCGTCCTTTTTTTCTCATGCTCCCTCCCTCTATTTCCCTCTTCT
TCATTTTCCTCCTCCTTCCTTTCCCTCCTTTTTTTCTCTCCTCCTCTCTC
TTTTATTCTTTCCCCCCGATTATCCCCCCCTCTTTCTTTCATATTCTTCT
TCCCTTCTCN

Query= MSMg01no136_m11.b1 MSMg01no136_m11.b1 CHROMAT_FILE:
MSMg01no136_m11.b1 PHD_FILE: MSMg01no136_m11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:16 2005
         (624 letters)



>mm_chr13_98253578_98254601
          Length = 1024

 Score =  961 bits (497), Expect = 0.0
 Identities = 518/525 (98%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctcaaaggtaccttcaaacatgtccatacgtaccagggctacaactgccctgga 63
           |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ggaattctcaaaggtacagtcaaacatgtccatacgtaccagggctacaactgccctgga 466

                                                                       
Query: 64  ttgtcaccatcctccgtggtttggctcagagcaggaaggaacagcatctatcctctgcaa 123
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ttgtcaccatcctccgaggtttggctcagagcaggaaggaacagcatctatcctctgcaa 406

                                                                       
Query: 124 acccacagttggagggtctggaaaccctactacttaaaccttctcatttctgcaggcgcc 183
           |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 405 acccacagttggagggtctggaaaccctgccacttaaaccttctcatttctgcaggcgcc 346

                                                                       
Query: 184 cactgggctgacctggcgacaggcttgggtgatagtgactgtgataacttggtatctctt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 cactgggctgacctggcgacaggcttgggtgatagtgactgtgataacttggtatctctt 286

                                                                       
Query: 244 ctccgaatgttacagctgctattgcatcaccccctttcgtctggctctttcttcccttag 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ctccgaatgttacagctgctattgcatcaccccctttcgtctggctctttcttcccttag 226

                                                                       
Query: 304 gacaactgactaatcatctcggttctaggaacttattcttaggaaacaaccagatgccta 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 gacaactgactaatcatctcggttctaggaacttattcttaggaaacaaccagatgccta 166

                                                                       
Query: 364 gccaaagctacgcatgcggaatcaattacagagctctttataatggtaaaagaaaaattc 423
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 gccaaagctaggcatgcggaatcaattacagagctctttataatggtaaaagaaaaattc 106

                                                                       
Query: 424 taagtttcgatcagtaggaggctggttaaattaataacaattcattcattttaagaaaat 483
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 105 taagtttcgatcagtaggaggctggttaaattaataacaattcattcactttaagaaaat 46

                                                        
Query: 484 atgtaaccatttaaatggtgacgtagacctgcatttatttacatg 528
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45  atgtaaccatttaaatggtgacgtagacctgcatttatttacatg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space:   622596
Effective search space used:   622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)