Query= MSMg01no137_o20.b1 MSMg01no137_o20.b1 CHROMAT_FILE:
MSMg01no137_o20.b1 PHD_FILE: MSMg01no137_o20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:47 2005
(652 letters)
>mm_chr13_19426138_19427189
Length = 1052
Score = 1197 bits (619), Expect = 0.0
Identities = 646/657 (98%), Gaps = 6/657 (0%)
Strand = Plus / Plus
Query: 1 aaatatcttaaataaaaccatagaataaaatttacctatactatgcatagtcccatgtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatatcttaaataaaaccatagaataaaatttacctatactatgcatagtcccatgtta 260
Query: 61 aaagttaccactattattaatactaatagtatcagtaatataaaaaaactcctttcttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaagttaccactattattaatactaatagtatcagtaatataaaaaaactcctttcttct 320
Query: 121 gatttgccttctcctgacctatctctgtgtctctctctgtctgtctctgtgcctctctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatttgccttctcctgacctatctctgtgtctctctctgtctgtctctgtgcctctctgt 380
Query: 181 gtctgtctctctgtctctctctctatctgtcggtctctatctgcctttccctctctctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtctgtctctctgtctctctctctatctgtcggtctctatctgcctttccctctctctcc 440
Query: 241 tcctcctcctctgaagtagtgttgcccaggctatcctcaatgtcatgctcttcctgctac 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 tcctcctcctctgaagtagtgttgcccaggctaccctcaatgtcatgctcttcctgctac 500
Query: 301 agcctcccaaaggtgatcagcacaacatctacctaaggatactttctgaaatcagaattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcctcccaaaggtgatcagcacaacatctacctaaggatactttctgaaatcagaattt 560
Query: 361 ttctacactaattgcatgattagattaattatatgtattatttcaaaatataactctaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttctacactaattgcatgattagattaattatatgtattatttcaaaatataactctaac 620
Query: 421 tttaatgggtaaaag----gagaggagaattttagag-gaaacaataagtgttcatcttc 475
||| ||||||||||| |||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 621 ttttatgggtaaaagaaaggagaggagaattttagagtgaa-caataagtgttcatcttc 679
Query: 476 cagaatcatggactgagtttataacgaatgctatggtccaacctggaaacagcttaatga 535
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 680 cagaatcatggactgagtttataatgaatgctatggtccaacctggaaacagcttaatga 739
Query: 536 tgtttttgtagtaatcaaacaaaaggaagtcatgaatcatggtacttttcaaataatttg 595
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tgtttttgtagtaatcaaacaaaaggaagtcatgaatcatggtacttttcaaataatttt 799
Query: 596 gtgaaaatatcaggtagatagatgttgtgtccggccaacagatcacaacatgggttc 652
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 800 gtgaaaatatcaggtagatagatgttgtgtctggccaacagatcacaacatgggttc 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no137_o20.g1 MSMg01no137_o20.g1 CHROMAT_FILE:
MSMg01no137_o20.g1 PHD_FILE: MSMg01no137_o20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:48 2005
(645 letters)
>mm_chr13_19603312_19604356
Length = 1045
Score = 727 bits (376), Expect = 0.0
Identities = 403/412 (97%)
Strand = Plus / Minus
Query: 1 tctgtgatactcacctcccatttctaggtttcataatttgtctcatgcaggttatgtgtc 60
||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 412 tctgtgatactcaactcacatttctagatttcataatttgtctcatgcaggttatgtgtc 353
Query: 61 aattttgataaactgattctagtaatccaaaagaataaaactaagtcattactaaaagga 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 agttttgataaactgattctagtaatccaaaagaataaaactaagtcattactaaaagga 293
Query: 121 ttctattttcctacatcagtcaacagagttaattaattttcaataaaatgcccagatgta 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 292 ttctattttcctacatcagtcaacagagttaatcaattttcaataaaatgcccagatata 233
Query: 181 tgtagggagaatgtggttaaaagttcttgaatctagattctgaaggctccggttcaagtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 tgtagggagaatgtggttaaaagttcttgaatctagattctgaaggctccggttcaagtc 173
Query: 241 gtttggagcataacttggataagggacagtttgttttgtttttatttgaaaatacatctc 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 172 gtttggagcataacttggataagggacagtttgttttgttttcatttgaaaatacatctc 113
Query: 301 tacatttcattactcaatcttgaaatctccaagaagcaatcagcatgttcctagaactgc 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 112 tacatttcattactcaatcttgaaatctccaagaagcaatcagcatgtttctagaactgc 53
Query: 361 tcttgagacgcctggaacaatcaatagcttcattaagtaaaataaaaatgtc 412
|||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 tcttgatacgcctggaacaatcaatagcttcattaagtaaaataaaaatgtc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
