Query= MSMg01no138_m22.b1 MSMg01no138_m22.b1 CHROMAT_FILE:
MSMg01no138_m22.b1 PHD_FILE: MSMg01no138_m22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:57 2005
(659 letters)
>mm_chr13_118866521_118867579
Length = 1059
Score = 1232 bits (637), Expect = 0.0
Identities = 637/637 (100%)
Strand = Plus / Minus
Query: 23 ctggccagtaagaggcctgagtcaaaaacaaaagagtccaaacaactaagttggtttttt 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1059 ctggccagtaagaggcctgagtcaaaaacaaaagagtccaaacaactaagttggtttttt 1000
Query: 83 tggttttttggttttttttccttaatcctctgcttctatcagcaggagttaaattgccag 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 999 tggttttttggttttttttccttaatcctctgcttctatcagcaggagttaaattgccag 940
Query: 143 aagctatccagttctagcccaagagagaaaaaatgagttaaattgccagaagtcagcagc 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 939 aagctatccagttctagcccaagagagaaaaaatgagttaaattgccagaagtcagcagc 880
Query: 203 ttttaaccccaatcagtgaggccataccccttgcttgccctccctgggaacctaattgtt 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879 ttttaaccccaatcagtgaggccataccccttgcttgccctccctgggaacctaattgtt 820
Query: 263 ggtgcaggactccagcaggagagaggatgggtgtgtataccaattcagcaaataaataat 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 ggtgcaggactccagcaggagagaggatgggtgtgtataccaattcagcaaataaataat 760
Query: 323 atttttctatgtgattcccattctttgagttgcaatactttagtgctatctgaatatacc 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 atttttctatgtgattcccattctttgagttgcaatactttagtgctatctgaatatacc 700
Query: 383 aatttttctctgcagtaaacagccagggaaagatgttcctaaatgagttaagttatttcc 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 aatttttctctgcagtaaacagccagggaaagatgttcctaaatgagttaagttatttcc 640
Query: 443 gattaggatgaagcttctaacacacaaaggcagtacgcatatattacatatccatcctct 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 gattaggatgaagcttctaacacacaaaggcagtacgcatatattacatatccatcctct 580
Query: 503 agccagaagtccatatttttagctgaacagtgtacacatcatttttcatttgatcaactt 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 agccagaagtccatatttttagctgaacagtgtacacatcatttttcatttgatcaactt 520
Query: 563 ctgcaggacacattaggataaagccacttcttcatcctctctcctttcacaggcttttca 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ctgcaggacacattaggataaagccacttcttcatcctctctcctttcacaggcttttca 460
Query: 623 gtttaatttacctgacactggaagctccatctccccc 659
|||||||||||||||||||||||||||||||||||||
Sbjct: 459 gtttaatttacctgacactggaagctccatctccccc 423
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no138_m22.g1 MSMg01no138_m22.g1 CHROMAT_FILE:
MSMg01no138_m22.g1 PHD_FILE: MSMg01no138_m22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:58 2005
(632 letters)
>mm_chr13_118793293_118794324
Length = 1032
Score = 1208 bits (625), Expect = 0.0
Identities = 630/632 (99%), Gaps = 1/632 (0%)
Strand = Plus / Plus
Query: 1 tcttgatca-tgtatgatcacctggcaggaatgaatttgtgcttgtgcttagaagcagat 59
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tcttgatcaatgtatgatcacctggcaggaatgaatttgtgcttgtgcttagaagcagat 259
Query: 60 gcacatttccttctgtagaggtaaaaggagctatattctggctcaatcatgatgcatatc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gcacatttccttctgtagaggtaaaaggagctatattctggctcaatcatgatgcatatc 319
Query: 120 acatcaagtgtttatagaagaatgcagaatccaggtgcacagtaaaaagattgggagagg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 acatcaagtgtttatagaagaatgcagaatccaggtgcacagtaaaaagattgggagagg 379
Query: 180 aggagagaaaaacaggaggcagcacagggaaaactccagaactgagttaattaagactgt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aggagagaaaaacaggaggcagcacagggaaaactccagaactgagttaattaagactgt 439
Query: 240 ggtaaatcagaggcagacaacatacactgctaatgaattggaaagcacatggagagagga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggtaaatcagaggcagacaacatacactgctaatgaattggaaagcacatggagagagga 499
Query: 300 gactttagagaagcctaaagcaagcactgacctgaggaaagagatctgaagattgctaca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gactttagagaagcctaaagcaagcactgacctgaggaaagagatctgaagattgctaca 559
Query: 360 cagctgcctttgtgacttaggagaatttaaataaagatccctcccccatctcagccccac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cagctgcctttgtgacttaggagaatttaaataaagatccctcccccatctcagccccac 619
Query: 420 aggggaccagtttaaaaaattaaaagaatatttataaagaaaatatacttactattttaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aggggaccagtttaaaaaattaaaagaatatttataaagaaaatatacttactattttaa 679
Query: 480 ctatagtatctattaatgttttacaaattatctttttgaagtcttcttagtttattttcc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ctatagtatctattaatgttttacaaattatctttttgaagtcttcttagtttattttcc 739
Query: 540 tattgccatgataaaatattcagaanaaaaaaagaaactttaggggaaaaaatatttatt 599
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 740 tattgccatgataaaatattcagaaaaaaaaaagaaactttaggggaaaaaatatttatt 799
Query: 600 ctgccacatggttcaagggtatggtcatcata 631
||||||||||||||||||||||||||||||||
Sbjct: 800 ctgccacatggttcaagggtatggtcatcata 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
