MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-140O15
Chromosome	13 (Build37)
Map Location	94,749,064 - 94,749,437
singlet/doublet	singlet
Overlap gene	none
Upstream gene	EG218444, Papd4, LOC100039163, Homer1, Jmy, EG619883, Bhmt, Bhmt2, Dmgdh, Arsb
Downstream gene	Cycs-ps3, Lhfpl2, Scamp1, LOC435378, ENSMUSG00000042857, Ap3b1, Tbca, Otp, Wdr41
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG218444 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218444 MGI:3647983
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Papd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100715 MGI:2140950
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039163 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039163
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs, 24 Proteins pseudo : _no_value

name	Homer1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26556 MGI:1347345
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Jmy (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57748 MGI:1913096
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG619883 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:619883 MGI:3643032
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 545 ESTs, 7 Proteins

name	Bhmt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12116 MGI:1339972
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bhmt2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64918 MGI:1891379
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dmgdh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74129 MGI:1921379
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arsb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11881 MGI:88075
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cycs-ps3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13066 MGI:109498
definition	note : cytochrome c, pseudogene 3 pseudo : _no_value

name	Lhfpl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218454 MGI:2145236
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scamp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107767 MGI:1349480
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC435378 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435378
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins pseudo : _no_value

name	ENSMUSG00000042857 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328309 MGI:3641792
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 50 ESTs

name	Ap3b1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11774 MGI:1333879
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tbca (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21371 MGI:107549
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Otp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18420 MGI:99835
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wdr41 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218460 MGI:2445123
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Papd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129890 GeneID:100715 MGI:2140950
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PAP associated domain containing 4 transcript_id : NM_133905.2

name	Homer1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22550099 GeneID:26556 MGI:1347345
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homer homolog 1 (Drosophila) transcript_id : NM_147176.1

name	Homer1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754223 GeneID:26556 MGI:1347345
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homer homolog 1 (Drosophila) transcript_id : NM_011982.1

name	Homer1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:41281770 GeneID:26556 MGI:1347345
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homer homolog 1 (Drosophila) transcript_id : NM_152134.1

name	Jmy (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61098107 GeneID:57748 MGI:1913096
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : junction-mediating and regulatory protein transcript_id : NM_021310.2

name	EG619883 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264617 GeneID:619883 MGI:3643032
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 545 ESTs, 7 Proteins product : predicted gene, EG619883 transcript_id : XM_884704.3

name	Bhmt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:74325340 GeneID:12116 MGI:1339972
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : betaine-homocysteine methyltransferase transcript_id : NM_016668.3

name	Bhmt2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:12584973 GeneID:64918 MGI:1891379
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : betaine-homocysteine methyltransferase 2 transcript_id : NM_022884.1

name	Dmgdh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802611 GeneID:74129 MGI:1921379
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dimethylglycine dehydrogenase precursor transcript_id : NM_028772.2

name	Arsb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125656170 GeneID:11881 MGI:88075
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : arylsulfatase B transcript_id : NM_009712.3

name	Lhfpl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803108 GeneID:218454 MGI:2145236
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lipoma HMGIC fusion partner-like 2 transcript_id : NM_172589.2

name	Scamp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037394 GeneID:107767 MGI:1349480
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : secretory carrier membrane protein 1 transcript_id : NM_029153.1

name	ENSMUSG00000042857 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264618 GeneID:328309 MGI:3641792
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 50 ESTs product : predicted gene, ENSMUSG00000042857 transcript_id : XM_001472542.1

name	Ap3b1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7106253 GeneID:11774 MGI:1333879
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adaptor-related protein complex 3, beta 1 subunit transcript_id : NM_009680.2

name	Tbca (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130449 GeneID:21371 MGI:107549
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tubulin cofactor a transcript_id : NM_009321.2

name	Otp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368132 GeneID:18420 MGI:99835
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : orthopedia homolog (Drosophila) transcript_id : NM_011021.2

name	Wdr41 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:123702000 GeneID:218460 MGI:2445123
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WD repeat domain 41 transcript_id : NM_172590.2

name	Papd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527122 CCDS:CCDS26686.1 GeneID:100715 MGI:2140950
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : cytoplasmic poly(A) polymerase product : PAP associated domain containing 4 protein_id : NP_598666.1

name	Homer1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22550100 GeneID:26556 MGI:1347345
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007216 - metabotropic glutamate receptor signaling pathway [Evidence TAS] codon_start : 1 exception : mismatches in translation note : isoform L is encoded by transcript variant L; homer, neuronal immediate early gene, 1; immediate early gene protein Homer1A product : homer homolog 1 isoform L protein_id : NP_671705.1

name	Homer1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754224 CCDS:CCDS26687.1 GeneID:26556 MGI:1347345
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007216 - metabotropic glutamate receptor signaling pathway [Evidence TAS] codon_start : 1 note : isoform S is encoded by transcript variant S; homer, neuronal immediate early gene, 1; immediate early gene protein Homer1A product : homer homolog 1 isoform S protein_id : NP_036112.1

name	Homer1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41281771 GeneID:26556 MGI:1347345
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007216 - metabotropic glutamate receptor signaling pathway [Evidence TAS] codon_start : 1 note : isoform d is encoded by transcript variant d; homer, neuronal immediate early gene, 1; immediate early gene protein Homer1A product : homer homolog 1 isoform d protein_id : NP_687036.1

name	Jmy (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61098108 CCDS:CCDS26688.1 GeneID:57748 MGI:1913096
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence IEA]; GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI]; GO:0005198 - structural molecule activity [Evidence IEA]; GO:0003713 - transcription coactivator activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007050 - cell cycle arrest [Evidence IDA]; GO:0006917 - induction of apoptosis [Evidence IDA]; GO:0051091 - positive regulation of transcription factor activity [Evidence IDA]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0043620 - regulation of transcription in response to stress [Evidence TAS] codon_start : 1 note : p300 transcriptional cofactor JMY product : junction-mediating and regulatory protein protein_id : NP_067285.2

name	EG619883 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82951989 GeneID:619883 MGI:3643032
definition	codon_start : 1 product : similar to ribosomal protein L30 protein_id : XP_889797.1

name	Bhmt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7709990 GeneID:12116 MGI:1339972
definition	EC_number : 2.1.1.5 GO_function : GO:0047150 - betaine-homocysteine S-methyltransferase activity [Evidence ISS] [Evidence IEA]; GO:0008898 - homocysteine S-methyltransferase activity [Evidence ISS] [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0009086 - methionine biosynthesis [Evidence IDA]; GO:0006479 - protein amino acid methylation [Evidence ISS]; GO:0050666 - regulation of homocysteine metabolism [Evidence ISS] codon_start : 1 product : betaine-homocysteine methyltransferase protein_id : NP_057877.1

name	Bhmt2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12584974 CCDS:CCDS26689.1 GeneID:64918 MGI:1891379
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0008898 - homocysteine S-methyltransferase activity [Evidence ISS] [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0009086 - methionine biosynthesis [Evidence ISS] codon_start : 1 exception : mismatches in translation product : betaine-homocysteine methyltransferase 2 protein_id : NP_075022.1

name	Dmgdh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21311901 CCDS:CCDS26690.1 GeneID:74129 MGI:1921379
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0004047 - aminomethyltransferase activity [Evidence IEA]; GO:0047865 - dimethylglycine dehydrogenase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006546 - glycine catabolism [Evidence IEA] codon_start : 1 product : dimethylglycine dehydrogenase precursor protein_id : NP_083048.1

name	Arsb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125656171 GeneID:11881 MGI:88075
definition	GO_component : GO:0005764 - lysosome [Evidence IEA] GO_function : GO:0004065 - arylsulfatase activity [Evidence IDA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003943 - N-acetylgalactosamine-4-sulfatase activity [Evidence IEA]; GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : arylsulfatase B structural; arylsulfatase B regulation; arylsulfatase B temporal regulation; arylsulfatase B complex product : arylsulfatase B protein_id : NP_033842.3

name	Lhfpl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369844 CCDS:CCDS26692.1 GeneID:218454 MGI:2145236
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : lipoma HMGIC fusion partner-like 2 protein_id : NP_766177.1

name	Scamp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037395 GeneID:107767 MGI:1349480
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0008021 - synaptic vesicle [Evidence TAS]; GO:0030672 - synaptic vesicle membrane [Evidence IDA]; GO:0042589 - zymogen granule membrane [Evidence IDA] GO_process : GO:0006887 - exocytosis [Evidence IMP]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : secretory carrier membrane protein 1 protein_id : NP_083429.1

name	ENSMUSG00000042857 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149264619 GeneID:328309 MGI:3641792
definition	codon_start : 1 product : hypothetical protein LOC328309 protein_id : XP_001472592.1

name	Ap3b1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753076 CCDS:CCDS26693.1 GeneID:11774 MGI:1333879
definition	GO_component : GO:0005905 - coated pit [Evidence IEA]; GO:0005802 - Golgi trans face [Evidence TAS] GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0019882 - antigen processing and presentation [Evidence IMP]; GO:0048007 - antigen processing and presentation, exogenous lipid antigen via MHC class Ib [Evidence IMP]; GO:0006897 - endocytosis [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence TAS]; GO:0051138 - positive regulation of NK T cell differentiation [Evidence IMP]; GO:0006622 - protein targeting to lysosome [Evidence IMP]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0016192 - vesicle-mediated transport [Evidence TAS] codon_start : 1 exception : mismatches in translation note : adaptor-related protein complex AP-3, beta 1 subunit; recombination induced mutation 2 product : adaptor-related protein complex 3, beta 1 subunit protein_id : NP_033810.1

name	Tbca (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678225 CCDS:CCDS26694.1 GeneID:21371 MGI:107549
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0051082 - unfolded protein binding [Evidence IEA] GO_process : GO:0007022 - chaperonin-mediated tubulin folding [Evidence IEA]; GO:0006457 - protein folding [Evidence IEA] codon_start : 1 note : cofactor A; co-chaperonin associated with a- & b-tubulin product : tubulin cofactor a protein_id : NP_033347.1

name	Otp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754958 CCDS:CCDS26695.1 GeneID:18420 MGI:99835
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : orthopedia homolog protein_id : NP_035151.1

name	Wdr41 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:123702001 GeneID:218460 MGI:2445123
definition	codon_start : 1 product : WD repeat domain 41 protein_id : NP_766178.2

name	LOC435378 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435378
definition	number : 4 pseudo : _no_value

name	LOC435378 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435378
definition	number : 3 pseudo : _no_value

name	LOC435378 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435378
definition	number : 2 pseudo : _no_value

name	LOC435378 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435378
definition	number : 1 pseudo : _no_value

name	EG218444 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149264611 GeneID:218444 MGI:3647983
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG218444 transcript_id : XR_035093.1

name	LOC100039163 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264616 GeneID:100039163
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs, 24 Proteins product : similar to glyceraldehyde-3-phosphate-dehydrogenase pseudo : _no_value transcript_id : XR_030703.1

clone name	MSMg01-307K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404F18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-079L01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-435M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374K19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-143J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333J01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-263O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270I08
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-140O15.T7 (MSMg01no140_o15.b1)	MSMg01-140O15.TJ (MSMg01no140_o15.g1)
ACC	AG345927	AG345928
length	738	721
length of high quality (start - end)	373 (70 - 442)	284 (83 - 366)
definition	CHROMAT_FILE: MSMg01no140_o15.b1 PHD_FILE: MSMg01no140_o15.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:58:48 2005	CHROMAT_FILE: MSMg01no140_o15.g1 PHD_FILE: MSMg01no140_o15.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:58:48 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NAATCATAATTTGCGGCGCTAAACGATCACTATCCAGAAGGAGCCGCGGA ATTCCTCAATTTCTGAAATCATTATTAAAGCATAATTGCAAATCCAAGGA ATTCTACAAGTCTGTCCCACGGGAGGTGGTAGAACTGGTGAGCATCCCCA GAGAGTGGGAAAGGAACAAAAGCAAATGCCTTTGATCTCTCAGCTACAAA GCAGCAGTGAGAGCCAGGTCCTGTGCTCTTGTATCCTCTGCCCCTTAGTC ACAGCCTAGAAATGTGCTCGTTGGCTGGGAGCGGAAGTGGAATTGCAACA GAAATGTGGCATTAGAATCTTTGCATCAGAACCAATGGCTTGTTGAAAAA TTGGGGGAAAAAATCTAACAATATTGGTGAATAAAGTCTGTAATGATGAA TCTCATTCAACTTCTTACGGTTTTTTTGGGGGGGTGGGGGAGGAGTCTTT ACCCCTTTTTCTCCTTTTCCTTCATAAATGTCCCCCTTTTTATTCTCCCC ATTTTTCATCTTTTTATTTTTATTCCATTTTTTAATCCATTTTCTATACT CCATATTCGCTTTTAATCTTAAACCCCTTTTTATTACATTATACCCTTTT TCTACCCATTCTTCCCTACATTTCTTTTTTTTTTTCCCTTTTTTCCCTTC TTCCATTTTTTCATTACACCCCTACATTTTATCTCCTCCCCCTATCTCAC TTCTTTTTTTTTACCCCCGCACTTACCCGCCTTTTACC	NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGGTGATCCAGTGCTC TCCTCTGGCCTCTGAGGGAACCTGCACACATGTGCCTCATGGTTTTGTTT GGTTCTTTTCCTCCCCCCTTCCTCCTTCCCACCTCCCTTCTTCCCCCTCT TAAACACACACATTTCTTCATAAAAGGAAAGGCTGTGAGGAGCTTGCTTA TAATTCCAGCACTCAGGGGGTTGAAGTGGGAGGATTGGGTCTACCAGGCC AGCCTTTGTTAAGAGGAAGTCTGTTTCAAAAATAAGGTGTGTGTTTGTAG GGGGTGGGGCTTGTGTTCAACACCCCCCCCGCTATAATATTCGTTATGCA AATGCGCCTTATTTCCCCACCATTCTATCTTCCAACTTGCTACACCTTCA ACACATCACAACTCATTTCCTCTCCCTTCTCTTTTTACCCTATTCCCCCA TGTTTCAATACATCAACCCTCCTTAATCTCCTCACCTCCTCTTATCTTAC ACTTCTATTTACTAAATCCTAATAACCTATTTTCTGCACCTTCCCTGTTT ATACACTATCCCCCCCCTTCCATATTCATCATCTACTCATTCGATCCTTC ACCTTCCCCTTACCAATGCCCCACGTCTTCCAATTTAATTCACCTTTTAT TCACATCCCCCATTCCTTACC
quality values	Open. Hide. 0 3 6 6 10 8 8 8 8 15 23 29 25 19 12 12 14 19 19 18 9 9 9 21 9 8 10 12 10 10 6 7 6 7 6 6 6 6 7 6 8 8 9 9 12 18 26 33 33 33 33 50 50 33 28 21 12 9 9 7 10 10 9 9 9 15 10 9 9 13 15 32 33 50 48 48 50 36 36 36 36 37 57 50 50 50 40 47 47 40 42 42 47 47 42 42 42 42 42 47 47 47 47 51 51 51 50 50 50 50 68 51 51 50 50 48 50 50 50 47 47 43 57 57 50 50 50 51 50 68 68 68 68 68 68 68 57 57 57 57 57 57 68 68 57 57 57 57 57 57 57 57 50 50 50 50 41 50 57 57 59 59 68 68 68 68 57 57 57 57 57 57 57 50 48 46 46 46 48 57 57 57 50 50 50 50 50 50 57 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 57 57 57 59 59 59 59 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 62 62 44 44 35 43 43 62 62 62 62 62 62 62 68 62 62 62 62 62 62 62 68 68 68 68 59 57 57 57 57 57 57 57 57 57 57 57 52 52 52 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 41 38 15 12 8 8 8 8 8 23 32 57 54 57 57 57 54 54 57 57 57 68 68 68 68 59 59 59 59 57 52 52 52 57 57 57 57 57 57 57 57 43 43 33 33 35 35 43 50 57 54 48 47 47 47 44 44 43 43 43 57 57 46 43 43 43 43 46 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 54 54 54 59 57 57 57 57 57 57 57 57 48 48 48 57 54 59 59 59 48 48 46 46 43 57 57 59 59 59 37 32 28 28 32 32 37 23 32 20 25 17 15 15 11 11 9 8 8 8 10 12 11 11 11 10 13 14 14 14 15 19 17 16 13 12 13 11 10 8 8 8 11 12 15 9 9 9 9 9 9 9 9 9 15 15 14 10 10 10 14 11 16 10 10 10 15 17 10 12 10 10 10 12 9 9 13 10 10 9 8 8 10 10 15 15 13 9 9 10 10 12 12 11 12 12 13 12 12 10 13 19 20 10 10 9 9 8 8 8 8 8 8 10 8 8 8 8 8 8 8 9 9 10 10 9 9 12 12 15 11 11 11 18 15 16 8 8 8 8 10 10 12 10 10 10 10 10 11 12 15 16 15 15 11 11 11 11 12 11 8 8 6 6 8 6 6 10 10 14 13 10 8 8 8 8 10 6 7 6 6 8 10 8 8 8 12 12 13 9 10 10 11 11 8 9 11 11 9 10 10 13 11 10 11 12 11 10 12 9 9 9 9 12 10 12 11 16 14 14 14 10 9 9 8 8 8 9 12 14 22 18 13 13 8 8 8 13 13 16 10 10 10 10 10 9 11 9 9 9 16 11 8 8 8 8 8 8 10 12 12 12 10 8 8 8 8 8 10 10 8 10 8 8 8 8 8 8 10 9 12 11 10 12 8 8 8 10 10 11 6 6 6 6 8 8 10 11 12 10 8 7 7 8 10 8 9 8 8 8 8	Open. Hide. 0 3 7 7 9 12 8 8 8 8 7 8 6 6 12 24 27 30 33 33 39 37 24 22 28 28 29 30 27 27 11 9 7 7 7 7 7 7 7 7 6 6 9 12 10 8 8 8 8 21 21 21 9 10 10 23 21 33 27 25 11 17 11 8 6 6 6 7 7 15 12 9 10 22 22 31 28 28 30 30 35 35 35 28 28 29 29 34 34 37 40 37 37 37 33 37 42 50 54 57 57 57 57 57 59 68 57 57 57 57 57 59 59 59 68 68 68 68 68 57 57 57 57 57 50 51 50 50 50 50 50 50 68 68 68 50 50 51 50 50 50 57 54 54 50 50 50 48 48 50 50 50 41 47 50 57 57 57 57 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 57 59 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 68 57 57 57 57 57 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 59 57 57 57 57 57 54 54 54 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 54 54 57 57 57 57 57 57 57 57 48 48 48 50 50 50 57 57 48 50 48 48 43 43 43 47 57 57 57 47 43 43 47 47 44 57 43 47 47 57 57 57 48 57 57 57 57 48 48 48 47 48 32 32 15 18 15 22 27 32 28 43 43 47 47 57 54 48 47 47 39 35 35 30 34 30 28 28 37 34 39 37 37 35 39 39 43 39 39 32 34 28 30 30 28 26 29 10 8 8 8 8 8 9 9 10 10 10 8 8 8 8 8 10 10 8 8 10 11 11 11 11 11 11 8 8 8 6 6 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 11 10 8 8 10 9 10 8 8 8 8 12 8 8 8 8 8 8 10 9 9 9 12 11 11 11 10 9 8 8 8 8 8 10 10 8 8 8 8 10 10 9 8 8 8 8 8 8 8 10 8 8 11 11 11 11 12 12 13 19 13 9 9 9 8 8 11 11 8 8 10 17 11 11 10 10 12 9 9 8 8 10 8 8 8 8 8 8 9 9 9 10 9 9 9 9 6 8 7 6 8 8 9 9 8 8 6 6 10 8 10 8 8 8 8 8 8 8 8 9 12 12 9 8 8 8 8 10 10 10 8 8 8 8 8 8 10 9 8 8 11 8 8 6 6 8 8 6 7 8 6 10 10 9 9 9 13 11 11 12 13 11 11 11 9 10 11 13 12 12 10 8 8 8 8 8 8 8 8 10 8 9 8 8 8 8 10 8 8 6 6 8 8 8 10 10 8 8 8 8 8 11 7 7 6 6 10 6 8 8 8 8 8 8 8 8 8 10 11 8 8 8 10 8 11 9 7 11 8 8 8 6 6 10 10 9 8 8 8 8 8 8 10 15 10 10 8 8 6 6 8 6 8 8 8 8 10 10 15 17 13 7 7 7 10 8 8 8 8 8 8 8 8 8 10 10 10 8 10 9 9 8 10 17 17 10 10 9 10 9 9 9 11 11 18 16 10 8 8 8 8 8 8 8 10 8 11 11 11

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no140_o15.b1 MSMg01no140_o15.b1 CHROMAT_FILE:
MSMg01no140_o15.b1 PHD_FILE: MSMg01no140_o15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:48 2005
         (373 letters)



>mm_chr13_94748864_94749637
          Length = 774

 Score =  700 bits (362), Expect = 0.0
 Identities = 371/374 (99%), Gaps = 1/374 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cattattaaagcataattgcaaatccaaggaattctacaagtctgtcccacgggaggtgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 cattattaaagcataattgcaaatccaaggaattctacaagtctgtcccacgggaggtgg 515

                                                                       
Query: 61  tagaactggtgagcatccccagagagtgggaaaggaacaaaagcaaatgcctttgatctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tagaactggtgagcatccccagagagtgggaaaggaacaaaagcaaatgcctttgatctc 455

                                                                       
Query: 121 tcagctacaaagcagcagtgagagccaggtcctgtgctcttgtatcctctgccccttagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tcagctacaaagcagcagtgagagccaggtcctgtgctcttgtatcctctgccccttagt 395

                                                                       
Query: 181 cacagcctagaaatgtgctcgttggctgggagcggaagtggaattgcaacagaaatgtgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 cacagcctagaaatgtgctcgttggctgggagcggaagtggaattgcaacagaaatgtgg 335

                                                                       
Query: 241 cattagaatctttgcatcagaaccaatggcttgttgaaaaattgggggaaaaaatctaac 300
           |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 cattggaaactttgcatcagaaccaatggcttgttgaaaaattgggggaaaaaatctaac 275

                                                                       
Query: 301 aatattggtgaataaagtctgtaatgatgaatctcattcaacttcttacggttttttt-g 359
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 274 aatattggtgaataaagtctgtaatgatgaatctcattcaacttcttacggttttttttg 215

                         
Query: 360 ggggggtgggggag 373
           ||||||||||||||
Sbjct: 214 ggggggtgggggag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 774
Length adjustment: 9
Effective length of query: 364
Effective length of database: 765
Effective search space:   278460
Effective search space used:   278460
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information