Query= MSMg01no142_o12.b1 MSMg01no142_o12.b1 CHROMAT_FILE:
MSMg01no142_o12.b1 PHD_FILE: MSMg01no142_o12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:11 2005
(486 letters)
>mm_chr13_72623847_72624736
Length = 890
Score = 822 bits (425), Expect = 0.0
Identities = 473/491 (96%), Gaps = 6/491 (1%)
Strand = Plus / Minus
Query: 1 gatgttttctcatagctttggtcctttcttctcccttttttctccttctttcttttgttt 60
|||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 762 gatgctttctcatagctttggtcctttcttctccctttcttctccttctttcttttgttt 703
Query: 61 cttccttacttctacttactaaaaatccatcctacatttagccaagcattggttgagggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 cttccttacttctacttactaaaaatccatcctacatttagccaagcattggttgagggt 643
Query: 121 tcagttaataaatgctgcttctaaaatagccaagatgaacaaacagactactagcatact 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 642 tcagttaataaatgctgcttctaaaatagccaagatgaacaaacagactattagcatact 583
Query: 181 atcacttgaattttaaaaagaattttgatgttgatagatataatataggaagaataattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 atcacttgaattttaaaaagaattttgatgttgatagatataatataggaagaataattt 523
Query: 241 tacttctgtttaaaaaagtcatatgcttttttgtaaataggaagtagaagaa-aagtata 299
||||||||||| ||||||| |||||||| | ||||||||||||| |||| || |||||||
Sbjct: 522 tacttctgttttaaaaagttatatgcttatatgtaaataggaagcagaa-aataagtata 464
Query: 300 aaatacccaaaaatctacctgacaaattatgttcagtgttccagatcatttatgaagata 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 aaatacccaaaaatctacctgacaaattatgttcagtgttccagatcatttatgaagata 404
Query: 360 taagaagcatgggctgtgcctttgactggaagactcgatattattaaacacacatggatt 419
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 403 taagaagcatgggctgtgcctgtgactggaagactccatattattaaacacacatggatt 344
Query: 420 tcaaagtgtaaacatagacatgcttatttaaccagc----aaaaaaatcactagatttgc 475
|||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 343 tcaaagtgcaaacatagacatgcttatttaaccagcaaaaaaaaaaatcactagatttgc 284
Query: 476 tattttaagtg 486
||||| |||||
Sbjct: 283 tatttgaagtg 273
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 890
Length adjustment: 10
Effective length of query: 476
Effective length of database: 880
Effective search space: 418880
Effective search space used: 418880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no142_o12.g1 MSMg01no142_o12.g1 CHROMAT_FILE:
MSMg01no142_o12.g1 PHD_FILE: MSMg01no142_o12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:11 2005
(667 letters)
>mm_chr13_72478525_72479591
Length = 1067
Score = 1191 bits (616), Expect = 0.0
Identities = 654/676 (96%), Gaps = 16/676 (2%)
Strand = Plus / Plus
Query: 1 gaaagcccgggagccaatggcaagaacaacccaggtccttgcctggacttctctttgtcc 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaaagcacgggagccaatggcaagaacaacccaggtccttgcctggacttctctttgtcc 260
Query: 61 ctaggcaggttatcatgtaagacagtagcagcctctgacccttatgtagcatatgctcaa 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 ctaggcaggttatcatgtaagacagtagcagcctccgacccttatgtagcatatgctcaa 320
Query: 121 tttccaggggcagcaaagtctctgatgaaaaacaaccagaaatctaggaagaccttggta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttccaggggcagcaaagtctctgatgaaaaacaaccagaaatctaggaagaccttggta 380
Query: 181 ctaatgggactcccctgactctggagaggagaggtgggactgatggtttccatggaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctaatgggactcccctgactctggagaggagaggtgggactgatggtttccatggaagat 440
Query: 241 gtctccccctactctgcctggcagcccctaacccattgcatcttcagcagcaacattgca 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 441 gtctccccctactctgcctggcagcccctaacccattgcagcttcagcagcaacactgca 500
Query: 301 gggtacattgcttgccatttcatagacataaaggacatcatactggtagctgttgaatta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gggtacattgcttgccatttcatagacataaaggacatcatactggtagctgttgaatta 560
Query: 361 actcacatcttcctgctgggaattaccagactcaatcactcacttgctggacctcaggac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actcacatcttcctgctgggaattaccagactcaatcactcacttgctggacctcaggac 620
Query: 421 tgtagatgacttccagggcacatcccagagcagctgacaatcccttcaaagaacttaatt 480
||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 621 tgtaggtgacttccagggcacatcccagagcagttgacaatcccttcaaagaacttaatt 680
Query: 481 ccacaatcatctccgggaaggttctatgtggacctaagtgaacttacggtttttggtctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccacaatcatctccgggaaggttctatgtggacctaagtgaacttacggtttttggtctc 740
Query: 541 acagaaaacaagccatccaaacaaggatgcccaagacacacaccatgcaagaaaaatgga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acagaaaacaagccatccaaacaaggatgcccaagacacacaccatgcaagaaaaatgga 800
Query: 601 gagtaaccaaatgccaaatgccaaagggagtccttactctaaagct---------actca 651
|||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 801 gagtaaccaaatgccaaa-------gggagtccttactctaaagcttacccggctactca 853
Query: 652 actcagccaaaccaca 667
||||||||||||||||
Sbjct: 854 actcagccaaaccaca 869
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space: 694449
Effective search space used: 694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
