Query= MSMg01no143_l09.b1 MSMg01no143_l09.b1 CHROMAT_FILE:
MSMg01no143_l09.b1 PHD_FILE: MSMg01no143_l09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:20 2005
(657 letters)
>mm_chr13_91003503_91004559
Length = 1057
Score = 1106 bits (572), Expect = 0.0
Identities = 628/650 (96%), Gaps = 7/650 (1%)
Strand = Plus / Minus
Query: 8 aattctaatttctctaaggaggg-ataattatgccaacttattttaaaatttgatacatt 66
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1057 aattctaatttctctaaggagggtataattatgccaacttattttaaaatttgatacatt 998
Query: 67 gaagtctggagaaatgattcagtggaagagtatacactgcttttccagaggaagactgtg 126
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 997 gaagtcaggagaaatgattcagtggaagagtatacactgcttttccagaggaagactgtg 938
Query: 127 tttagttccctccatctacatcagttggctcacaactatttgtcattccagtttcaggat 186
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 937 ttcagttccctccatctacatcaattggctcacaactatttgtcattccagtttcaggat 878
Query: 187 atccagcatccttttctgaacactgtggacattcacagctatgtggtacacgtgcatgaa 246
||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 877 atccagcatccttttctgaacactgtgaacattcacagctatgtggtacatgtgcatgaa 818
Query: 247 tgtttaaagtttgataatctaagttcttaggttttgtacttaacaattacacagagatta 306
||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 817 tgtttaaagtttgataaactaagttcttaggtttggtacttaacaattacacagagatta 758
Query: 307 ctactatatagcagagagctttctaagcatttagtagagtcaacatgtacattcatctag 366
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 ctactatatagcagagagttttctaagcatttagtagagtcaacatgtacattcatctag 698
Query: 367 gtcaaacgacttaatgagaggaaattcatgtataaaggatttttctagggagcagaggca 426
|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 697 gtcaaatgacttaatgagaggaaattcatgtataaaggattcttctagggagcagaggca 638
Query: 427 atataaaagactggacatggtccgtgaagataatgaaagtctagatgggcggtgatcatt 486
|||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 637 atataagagactggacatggtccatgaagataatgaaagtctagatgggcagtgatcatt 578
Query: 487 gcctttcatgcctagagtgcactgtgtgtaacttgtcaactgagcaggttgccacgcata 546
||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 577 gcctttcatgcctagagtgcactgtgtgtaacttggcaactgagcaggtggccacgcata 518
Query: 547 ccattctgccttcagatgccaatggacatcttccttcttatttttttaaagtctttcact 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ccattctgccttcagatgccaatggacatcttccttcttatttttttaaagtctttcact 458
Query: 607 ctgactttctttttattattattattttttttaattaggtattttcctca 656
||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 457 ctgactttctttttattatta------tttttaattaggtattttcctca 414
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_l09.g1 MSMg01no143_l09.g1 CHROMAT_FILE:
MSMg01no143_l09.g1 PHD_FILE: MSMg01no143_l09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:20 2005
(623 letters)
>mm_chr13_90938149_90939171
Length = 1023
Score = 1127 bits (583), Expect = 0.0
Identities = 613/623 (98%), Gaps = 2/623 (0%)
Strand = Plus / Plus
Query: 1 agcacagaacaaaagggagaaaaaaaaatcctccatttcagagaattcattcaagtccca 60
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 agcacagaacaaaaggg-ggaaaaaaaatcctccatttcagagaattcattcaagtccca 261
Query: 61 gttactatatatcttaattctttgaagaacattaataaaataaaataataataattaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 262 gttactatatatcttaattctttgaagaacattaataaaataaaataataa-aaataaaa 320
Query: 121 aaaccttcccacttcaacaaacaaaagacttggatactccttcaagccctgaatctttag 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaccttcctacttcaacaaacaaaagacttggatactccttcaagccctgaatctttag 380
Query: 181 tcctcccacacttttgccttgatgcccgataaccgactgataagcaaccaatacatcaga 240
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 381 tcctcccacacttttgccttgatgcctgataagcgactgataagcaaccaatacatcaga 440
Query: 241 gggatgccccgtttgtgtttatcttcattatctttatgagatggcattaacctttgccct 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggatgccccgtttgagtttatcttcattatctttatgagatggcattaacctttgccct 500
Query: 301 ttgagataacggaatctgttgtcctcagatcgaacaaagcacactagcatcagacgagtc 360
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 ttgagataatggaatctgttgtcctcagatcgaacaaagcaaactagcatcagacgagtc 560
Query: 361 tgaaaagtgtgtctctgggatgctggctttcagtgtcctatccagctctgcaaatctccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgaaaagtgtgtctctgggatgctggctttcagtgtcctatccagctctgcaaatctccc 620
Query: 421 cgatgcctgccacccctaaagcattcaggagcagtgttatttgctcatatccactagcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cgatgcctgccacccctaaagcattcaggagcagtgttatttgctcatatccactagcaa 680
Query: 481 ttgaaaagtagcagactccagaaccaatgactagtcctcccaccccaagataaccctgac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttgaaaagtagcagactccagaaccaatgactagtcctcccaccccaagataaccctgac 740
Query: 541 cccagtaaagccaacatctgtcttgtgtttgaggtggctgacagccaaccagggatcaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cccagtaaagccaacatctgtcttgtgtttgaggtggctgacagccaaccagggatcaga 800
Query: 601 aaacaataatttccctggtcaga 623
|||||||||||||||||||||||
Sbjct: 801 aaacaataatttccctggtcaga 823
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space: 620969
Effective search space used: 620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
