Query= MSMg01no143_m03.b1 MSMg01no143_m03.b1 CHROMAT_FILE:
MSMg01no143_m03.b1 PHD_FILE: MSMg01no143_m03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:23 2005
(367 letters)
>mm_chr13_86200355_86201122
Length = 768
Score = 661 bits (342), Expect = 0.0
Identities = 360/366 (98%), Gaps = 3/366 (0%)
Strand = Plus / Minus
Query: 4 gaattcattgtttttc-tccttatttgaggctacagtgtcttgtttgaagtgagaaacct 62
|||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gaattcattg-ttttcatcattatttgaggctacagtgtcttgtttgaagtgagaaacct 510
Query: 63 ctgggaaatgtgtagaagctagaaaaccacccag-aaaaaaaatgatgacatttgtttca 121
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 509 ctgggaaatgtgtagaagctagaaaaccacccagaaaaaaaaatgatgacatttgtttca 450
Query: 122 agtccccacatttgtactgcgtcatcctataaagaaaatatgagatctcctttgaggaga 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 agtccccacatttgtactgcgtcatcctataaagaaaatatgagatctcctttgaggaga 390
Query: 182 tgttcagccaacacatttctgacttgatctcagctacacaaaattccccaatggtggtag 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tgttcagccaacacatttctgacttgatctcagctacacaaaattccccaatggtggtag 330
Query: 242 ctgtttggtctactgaattctgggcatgagtagtgcatgcctcctatagacctacccctg 301
|||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 329 ctgtttgggctactgaattctgggtatgagtagtgcatgcctcctatagacctacccctg 270
Query: 302 aattcttctgctgagcgattttttttttccttgcctagtacattggcaaagttagtctag 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aattcttctgctgagcgattttttttttccttgcctagtacattggcaaagttagtctag 210
Query: 362 aggtgt 367
||||||
Sbjct: 209 aggtgt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 768
Length adjustment: 9
Effective length of query: 358
Effective length of database: 759
Effective search space: 271722
Effective search space used: 271722
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_m03.g1 MSMg01no143_m03.g1 CHROMAT_FILE:
MSMg01no143_m03.g1 PHD_FILE: MSMg01no143_m03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:24 2005
(328 letters)
>mm_chr13_86093046_86093773
Length = 728
Score = 619 bits (320), Expect = 0.0
Identities = 326/328 (99%)
Strand = Plus / Plus
Query: 1 ttgaaattatgagattaagataaagatatttggaaaagagattgatttttataaaagtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgaaattatgagattaagataaagatatttggaaaagagattgatttttataaaagtta 260
Query: 61 catctattgtatgttcagttctaggtacagcaatatgtatattatacaattattaatact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catctattgtatgttcagttctaggtacagcaatatgtatattatacaattattaatact 320
Query: 121 ctcaccaaaatgaaaagttttccaattatgttttaaagatagagttaaaatatatgaatt 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 ctcaccaaaatgaaaagttttccaattatgttttaaagatagagttaagatatatgaatt 380
Query: 181 tcccatttgctattctctggaatgtaggtagaaaaatgtaaaagttacaacagtagtcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcccatttgctattctctggaatgtaggtagaaaaatgtaaaagttacaacagtagtcaa 440
Query: 241 tgtttgtcttatcctgaagcttttctcttatagtgttttttgtttgtgtttttttgtttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtttgtcttatcctgaagcttttctcttatagtgttttttgtttgtgtttttttgtttt 500
Query: 301 gttttgttttgtttgtttttagtttgtt 328
||||||||||||||||||| ||||||||
Sbjct: 501 gttttgttttgtttgttttaagtttgtt 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 728
Length adjustment: 9
Effective length of query: 319
Effective length of database: 719
Effective search space: 229361
Effective search space used: 229361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
