Query= MSMg01no147_p04.b1 MSMg01no147_p04.b1 CHROMAT_FILE:
MSMg01no147_p04.b1 PHD_FILE: MSMg01no147_p04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:41 2005
(591 letters)
>mm_chr13_31238184_31239174
Length = 991
Score = 774 bits (400), Expect = 0.0
Identities = 427/436 (97%)
Strand = Plus / Minus
Query: 4 ggaattccatgtaaatcctgattttaaaacactgtcttgtgagcgaactgtaagctagct 63
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 436 ggaattccatgtaaatcctgatttaaaaacactgtcttgtgagcgaactgtaagctagct 377
Query: 64 catgtgaaaatgataggaaccctggagattgtcttcctctctcaaagccggacactgtcc 123
||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 376 catgtgaaaatgatagggaccctggagattgtctccctctctcaaagctggacactgtcc 317
Query: 124 gtcctttctatgacagctttccaaagcaggtgtgccccttcacatcaccatcacttcacc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gtcctttctatgacagctttccaaagcaggtgtgccccttcacatcaccatcacttcacc 257
Query: 184 acagcttcccttgcagactcccctgcgagatcaaaaaagtaagaagggatcccgcaaaga 243
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 acggcttcccttgcagactcccctgcgagatcaaaaaagtaagaagggatcccgcaaaga 197
Query: 244 caacagttaatcacacaagaaagacagaatgggagaaaatccttgacagctgtacatatg 303
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 caacagtaaatcacacaagaaagacagaatgggagaaaatccttgacagctgtacatatg 137
Query: 304 acagagaaataaattctaaaataaacaaagaactcaaaagttgcaagaaaaaaaataaga 363
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 136 gcagagaaataaattctaaaataaacaaagaactcaaaagttacaagaaaaaaaataaga 77
Query: 364 acaagaaaatgaacaacccagttactatatgggctagttaaatgatcaaaagggggtgta 423
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 76 acaagaaaatgaacaacccagtcactatatgggctagttaaatgatcaaaagggggtgta 17
Query: 424 cagttggtcagtggac 439
||||||||||||||||
Sbjct: 16 cagttggtcagtggac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space: 569961
Effective search space used: 569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no147_p04.g1 MSMg01no147_p04.g1 CHROMAT_FILE:
MSMg01no147_p04.g1 PHD_FILE: MSMg01no147_p04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:41 2005
(342 letters)
>mm_chr13_31127536_31128277
Length = 742
Score = 561 bits (290), Expect = e-164
Identities = 326/342 (95%), Gaps = 7/342 (2%)
Strand = Plus / Plus
Query: 1 ctgtcttgacttctttcaatgaggaacagtgctgtgggaatataagccaaacaaattatt 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgtcttgacttctttcaatgagaaacagtgctgtgggaatataagccaaacaaattatt 260
Query: 61 tcctccgcaagtttctttcatggtgtttcatcacagcaacagtaacactaagagacaggg 120
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcatccgcaagtttctttcatggtgtttcatcacagcaacagtaacactaagagacagga 320
Query: 121 tatgttctaaaggtgtggtgccagtaaaaataaaatagaaagatgagttgggctataggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatgttctaaaggtgtggtgccagtaaaaataaaatagaaagatgagttgggctataggt 380
Query: 181 acttacatgagagcatgtattcaagacacacaatttgttgtgtttggcattagtctactg 240
||||||||||||||||| |||||||||||||||||| ||||||| |||||||||
Sbjct: 381 acttacatgagagcatgcattcaagacacacaatttattgtgtt-------agtctactg 433
Query: 241 gggcagcttgcaaagttcagactcatgtaacttattctcagggtttaaatactggacctt 300
|||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 434 gggcagcttgcaaagttcagactcatgtaactcattctcaggttttaaatactggacctt 493
Query: 301 ccagacccaactttccaggaaataggagggttgttctggacc 342
||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 494 ccagacccaactttccagggaataggagggttgtgctggacc 535
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
