Query= MSMg01no148_c10.b1 MSMg01no148_c10.b1 CHROMAT_FILE:
MSMg01no148_c10.b1 PHD_FILE: MSMg01no148_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:57 2005
(671 letters)
>mm_chr13_82648018_82649088
Length = 1071
Score = 1274 bits (659), Expect = 0.0
Identities = 665/667 (99%)
Strand = Plus / Minus
Query: 5 gaattccagccctcccagagttttacacatgagcaatcaccatgagagatgcctgagagc 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 gaattccagccctcctagagttttacacatgagcaatcaccatgagagatgcctgagagc 812
Query: 65 acataggcaaaaggagaggtggacatcattcatgaaacacacatcaacggctgactgaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 acataggcaaaaggagaggtggacatcattcatgaaacacacatcaacggctgactgaaa 752
Query: 125 catttttgcaatatcacacggtgacactcattactggtccaagtagaggcacagggtatc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 catttttgcaatatcacacggtgacactcattactggtccaagtagaggcacagggtatc 692
Query: 185 agaagactaaacatggtcaccagcggtgcaatgttctcacatgcagagactatcagagaa 244
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 acaagactaaacatggtcaccagcggtgcaatgttctcacatgcagagactatcagagaa 632
Query: 245 ctgcaaaccatgacactttctctttacttttgtccttgcataaatgaaaagtacaaagtt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ctgcaaaccatgacactttctctttacttttgtccttgcataaatgaaaagtacaaagtt 572
Query: 305 gagctgcaagcctggctcagttgggggtacattttcaaaagtaagctcatggtataaata 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 gagctgcaagcctggctcagttgggggtacattttcaaaagtaagctcatggtataaata 512
Query: 365 aaaattggcttaattattattttctatgcatgtcactcagtttccacagaccttttctaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 aaaattggcttaattattattttctatgcatgtcactcagtttccacagaccttttctaa 452
Query: 425 tctgtggtagaaaatttgcaggggaagattaagagcagaaccacagatgcagagagaggg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tctgtggtagaaaatttgcaggggaagattaagagcagaaccacagatgcagagagaggg 392
Query: 485 aaactaagatttgcattgaacaatagtgtcaaacgttaaagagacatcgaggagacccac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 aaactaagatttgcattgaacaatagtgtcaaacgttaaagagacatcgaggagacccac 332
Query: 545 tgccaatgtgttacgtcctgcctagatcctaaacagctgctccactctgataaccctgag 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tgccaatgtgttacgtcctgcctagatcctaaacagctgctccactctgataaccctgag 272
Query: 605 gctctattgcccatttgagaaatctgtttaaatttatttgtttcttcatgattctcttgt 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 gctctattgcccatttgagaaatctgtttaaatttatttgtttcttcatgattctcttgt 212
Query: 665 ccgggaa 671
|||||||
Sbjct: 211 ccgggaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space: 701321
Effective search space used: 701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_c10.g1 MSMg01no148_c10.g1 CHROMAT_FILE:
MSMg01no148_c10.g1 PHD_FILE: MSMg01no148_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:57 2005
(643 letters)
>mm_chr13_82492285_82493327
Length = 1043
Score = 1207 bits (624), Expect = 0.0
Identities = 639/644 (99%), Gaps = 2/644 (0%)
Strand = Plus / Plus
Query: 1 acatagctctgtgtaactcagtcttgaaaacgaaagttgctgtccataccacagtgatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acatagctctgtgtaactcagtcttgaaaacgaaagttgctgtccataccacagtgatat 260
Query: 61 tggaaggtcagatgaactcaaaaatttgagagttctgcaatttgcaaataagagtaattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggaaggtcagatgaactcaaaaatttgagagttctgcaatttgcaaataagagtaattt 320
Query: 121 taagcaatgatttaatctgttttctaaagcaaaactgactagtgctctatctactttgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taagcaatgatttaatctgttttctaaagcaaaactgactagtgctctatctactttgca 380
Query: 181 accttcatttgtgctaagttgatttgaggtgacatcaatgaatcattataagtaccccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accttcatttgtgctaagttgatttgaggtgacatcaatgaatcattataagtaccccac 440
Query: 241 ttaaaactgtgaagaattgccacatgactcatggatttgaacgacaaagaagttcatgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttaaaactgtgaagaattgccacatgactcatggatttgaacgacaaagaagttcatgca 500
Query: 301 tagaaatatgatgaaatacaaatctaattactatcaatccaaaccagtaatatgcctaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagaaatatgatgaaatacaaatctaattactatcaatccaaaccagtaatatgcctaga 560
Query: 361 tttctcccactaataagattattcttaatccaagggtttcagggaggggaaggtcccttg 420
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 561 tttctcccactaataagattattcttaatccaagggtttcagtgaggggaaggtcccttg 620
Query: 421 gattccaaaa-aataagccatatttaaaatgccaattggaattacataaaggcaccaatc 479
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 621 gattccaaaagaataagccatatttaaaatgccaattggaattacataaaggcacccatc 680
Query: 480 tgagaacacatggagagctccagagaacaggattctggcctgtgtcttaggttaacaggg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgagaacacatggagagctccagagaacaggattctggcctgtgtcttaggttaacaggg 740
Query: 540 gaaaatgagatagaaaaaataactatctgctgagagaatgaataaaggagtcctataact 599
||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaaaatgagatcgaaaaa-taactatctgctgagagaatgaataaaggagtcctataact 799
Query: 600 acagtacaatgcagttttattattcttactgtgctctgagtcca 643
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 acagtacaatgcagttttattattcttactgtgctctgagtcca 843
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space: 653889
Effective search space used: 653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
