Query= MSMg01no149_b18.b1 MSMg01no149_b18.b1 CHROMAT_FILE:
MSMg01no149_b18.b1 PHD_FILE: MSMg01no149_b18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:15 2005
(649 letters)
>mm_chr13_104040748_104041797
Length = 1050
Score = 1207 bits (624), Expect = 0.0
Identities = 639/644 (99%), Gaps = 1/644 (0%)
Strand = Plus / Plus
Query: 7 gaattcctccttgctca-atgattccaggataaggagacaaactcttgtgtttgtgatgt 65
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcctccttgttcacatgattccaggataaggagacaaactcttgtgtttgtgatgt 266
Query: 66 aggcttcctaaaaacatacacataagaagtgaaatagaagaggtataatttggaaagagg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aggcttcctaaaaacatacacataagaagtgaaatagaagaggtataatttggaaagagg 326
Query: 126 aacaggaccagcagaagaggtcgattatagggagaaattggggaaatatgagccaaagta 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aacaggaccagcagaagaggtcgattatagggagaaattggggaaatatgagccaaagta 386
Query: 186 ttttttcatatattgtcataatgagaccctgggttcaacactcaacaccaaaaggaagtt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ttttttcatatattgtcataatgagaccctgggttcaacactcaacaccaaaaggaagtt 446
Query: 246 acaataaaaaccatcatgaacactcgctggctaaacacaaaaactgtatttatggcccaa 305
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 447 acaataaaaaccatcatgaacactctctggcaaaacacaaaaactgtatttatggcccaa 506
Query: 306 atactctctaggtgtgtacattttacaatggtttaatcatgtaaacgatcctacgacctc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 atactctctaggtgtgtacattttacaatggtttaatcatgtaaacgatcctacgacctc 566
Query: 366 atatacttatctctttgtgctgagaacattcactggggacctatttattaatttccattt 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 atatacttatctctttgtgctgagaacattcactggggacctatttattaatttccattt 626
Query: 426 ttacataattaactgtagtctctttgttctacagtagtccacagaactgcttgacgcatc 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ttacataattaactgtagtctctttgttctacagtagtccacagaactgcttgacgcatc 686
Query: 486 tctgtcaaccctggtcattgacaaccaccgttgtcactgccttagtgtagctttgtaggt 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tctgtcaaccctggtcattgacaaccaccgttgtcactgccttagtgtagctttgtaggt 746
Query: 546 gctgtgtagtgccgtcatgcggcgtctgtcttttctataatcaatatatttcgctcagca 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 gctgtgtagtgccgtcatgcggcgtctgtcttttctataatcaatatatttcgctcagca 806
Query: 606 taatatgctccaagtctttccatgttgggacagcatagactctc 649
||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 807 taatatgctccaagtctttccatgttgggacagcacagactctc 850
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1050
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1040
Effective search space: 664560
Effective search space used: 664560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no149_b18.g1 MSMg01no149_b18.g1 CHROMAT_FILE:
MSMg01no149_b18.g1 PHD_FILE: MSMg01no149_b18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:15 2005
(427 letters)
>mm_chr13_104204023_104204849
Length = 827
Score = 774 bits (400), Expect = 0.0
Identities = 406/408 (99%)
Strand = Plus / Minus
Query: 20 ctgtttagtcagggtagaatcagttggtacccattccaggaactgccaccagtcttgtta 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ctgtttagtcagggtagaatcagttggtacccattccaggaactgccaccagtcttgtta 568
Query: 80 gtcttcaagaattaggtaatgaagtccccaggtgcctggacctctcccagctttctaacc 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gtcttcaagaattaggtaatgaagtccccaggtgcctggacctctcccagctttctaacc 508
Query: 140 agggtccatggtggtaattggcaaggtaaggtgacattgttctccctgcttgctatcctg 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 agggtccatggtggtaattggcaaggtaaggtgacattgttctccctgcttgctatcctg 448
Query: 200 gaaatatcagcactgtatggtgtaacccaaaagaattctgcccagaatccctttatgagc 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gaaatatcagcactgtatggtgtaacccaaaagaattctgcccagaatccctttatgagc 388
Query: 260 tgtcaagataggcaagaaattttgggagcttaattaattatttctagaaaatcattttta 319
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tgtcaagacaggcaagaaattttgggagcttaattaattatttctagaaaatcattttta 328
Query: 320 aatgtaagtgccatggtagagcaactcattaaggctgtcattcctatttgtatgacaatg 379
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aatgtaagtgccatggtagagtaactcattaaggctgtcattcctatttgtatgacaatg 268
Query: 380 ttcaccaagccatcacttagagtagcatccttggataagaggacaaca 427
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ttcaccaagccatcacttagagtagcatccttggataagaggacaaca 220
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
