Query= MSMg01no149_c03.b1 MSMg01no149_c03.b1 CHROMAT_FILE:
MSMg01no149_c03.b1 PHD_FILE: MSMg01no149_c03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:17 2005
(413 letters)
>mm_chr13_73337843_73338660
Length = 818
Score = 762 bits (394), Expect = 0.0
Identities = 410/418 (98%), Gaps = 5/418 (1%)
Strand = Plus / Minus
Query: 1 acaccttcaagacctcagaccctcttttgggtcactaagcatgaaaattcatatgcacat 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 618 acaccttcaagacctcagaccctcttctgggtcactaagcatgaaaattcatatgcacat 559
Query: 61 ggtacatttattttcttctatttttattaatagcatttgttctttaataattttgtgcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ggtacatttattttcttctatttttattaatagcatttgttctttaataattttgtgcat 499
Query: 121 gcatataatccattctgattgctctcaacatcaccctctctcat-----cccccccatcc 175
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 498 gcatataatccattctgattgctctcaacatcaccctctctcatctccccccccccatcc 439
Query: 176 acccctttccatactgacctttttacacatttatgtctttttgttttgcttgtgtttctc 235
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 438 acccctttccatactgacctttttacacatctatgtctttttgttttgcttgtgtttctc 379
Query: 236 tgggttccaccagggctgtctgtgtggactccttatcagaactactcatttgattgtggt 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tgggttccaccagggctgtctgtgtggactccttatcagaactactcatttgattgtggt 319
Query: 296 ctagaccagtcaatgactccacaactgaagacaatgatcttactctcagactccatcact 355
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 318 ctagaccagtcaatgactccacaactgaagataatgatcttactctcagactccatcact 259
Query: 356 aggccatagctcagaagtaagggtgactcctccatctaggactgaatgttgagaggtc 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 aggccatagctcagaagtaagggtgactcctccatctaggactgaatgttgagaggtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 818
Length adjustment: 9
Effective length of query: 404
Effective length of database: 809
Effective search space: 326836
Effective search space used: 326836
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no149_c03.g1 MSMg01no149_c03.g1 CHROMAT_FILE:
MSMg01no149_c03.g1 PHD_FILE: MSMg01no149_c03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:17 2005
(368 letters)
>mm_chr13_73258092_73258859
Length = 768
Score = 681 bits (352), Expect = 0.0
Identities = 364/368 (98%)
Strand = Plus / Plus
Query: 1 catttgcactattcacagaagcgggaaactgaaagtgatcattggtgaggtggttcgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catttgcactattcacagaagcgggaaactgaaagtgatcattggtgaggtggttcgaat 260
Query: 61 agccagctctggtgattgcatagattatttgttttgctttgctttgttttttgtgttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agccagctctggtgattgcatagattatttgttttgctttgctttgttttttgtgttctt 320
Query: 121 gccttgcaattaaacacagaaacaaacaatgtcagaggaggtaagcttatgaaacactag 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 gccttgcaattaaacacagaaacaaacaatgtcagaggaggtaagcttacgaaacactag 380
Query: 181 ttggaagagaccgtggtacacagaacttccaccagaagcagaactctttaagggtcagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 ttggaagagaccgtggtacacagaacttccaccagaagcagaactctttaaaggtcagca 440
Query: 241 tgtttcttgatgcctaaacaaacttgaggactgagagcagaggctgaggctggaaattca 300
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 tgtttcttgttgcctaaacaaacttgaggactaagagcagaggctgaggctggaaattca 500
Query: 301 acacatgcagcattgacacaccccaaagggcagggcctctagcacaataaactgtgccat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acacatgcagcattgacacaccccaaagggcagggcctctagcacaataaactgtgccat 560
Query: 361 aaatgtac 368
||||||||
Sbjct: 561 aaatgtac 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
