Query= MSMg01no150_g03.b1 MSMg01no150_g03.b1 CHROMAT_FILE:
MSMg01no150_g03.b1 PHD_FILE: MSMg01no150_g03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:55 2005
(480 letters)
>mm_chr13_80627899_80628778
Length = 880
Score = 609 bits (315), Expect = e-178
Identities = 376/417 (90%), Gaps = 34/417 (8%)
Strand = Plus / Minus
Query: 5 gaattccttcaatatggcagacatttggtttgattattgtaatgatagtttttattaact 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gaattccttcaacatggcagacatttggtttgattattgtaatgatagtttttattaact 358
Query: 65 tacaatttcataaacgtgttacctttcctctcagtttaatcctattttccttttccattg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tacaatttcataaacgtgttacctttcctctcagtttaatcctattttccttttccattg 298
Query: 125 catcatctttgtgtcccattttcctctttcaatatcaatttttgctaaatattcttgggt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 catcatctttgtgtcccattttcctctttcaatatcaatttttgctaaatattcttgggt 238
Query: 185 gtgtggctttccactgatctgtggtcaaatagttctctctctctctctctctctctctct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 gtgtggctttccactgatctgtggtcaaatagttctctctctctctctctctctctctct 178
Query: 245 ctctctctctctctctctctctct-----t-tatatatatatatata------------- 285
|||||||||||||| | | | | | | ||||||||||||||||
Sbjct: 177 ctctctctctctctatatatatatatatatatatatatatatatatatgtgtgtgtgtgt 118
Query: 286 ---------------tatgttcagatggtgtcccaagtctaacccgctgggtgaggctgt 330
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 gtgtgtgtgtgtgtgtatgttcagatggtgtcccaagtctaacccgctgggtgaggctgt 58
Query: 331 acgcaggaagtttaactgtgcaccccacgctgttgctggacatgcgccaagctgtaa 387
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 57 acgcaggaagtttaactgtgcaccccacgctgttgctggacatgcgctaagctgtaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 71
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space: 408900
Effective search space used: 408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no150_g03.g1 MSMg01no150_g03.g1 CHROMAT_FILE:
MSMg01no150_g03.g1 PHD_FILE: MSMg01no150_g03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:55 2005
(244 letters)
>mm_chr13_80475598_80476241
Length = 644
Score = 456 bits (236), Expect = e-133
Identities = 242/244 (99%)
Strand = Plus / Plus
Query: 1 gaatgagacatagtatggttatacttaatgggtttcactttaatggtacttactgccttg 60
|||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 201 gaatgagacatagtatggttatactttatgggtctcactttaatggtacttactgccttg 260
Query: 61 gagtagcgattttgtagtctaaaaccatagctttctatgttatatatttaagtcgaaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagtagcgattttgtagtctaaaaccatagctttctatgttatatatttaagtcgaaaca 320
Query: 121 tggttgtctgaaaaatccagagacataaaggctagttatctattctagtgaattattaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggttgtctgaaaaatccagagacataaaggctagttatctattctagtgaattattaaa 380
Query: 181 cagttcttttaaaaatgcaattttaaacagtaaaatgacatctcactaagaaatgttatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagttcttttaaaaatgcaattttaaacagtaaaatgacatctcactaagaaatgttatt 440
Query: 241 ttga 244
||||
Sbjct: 441 ttga 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
