Query= MSMg01no151_b12.b1 MSMg01no151_b12.b1 CHROMAT_FILE:
MSMg01no151_b12.b1 PHD_FILE: MSMg01no151_b12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:49 2005
(316 letters)
>mm_chr13_56281726_56282441
Length = 716
Score = 549 bits (284), Expect = e-161
Identities = 308/320 (96%), Gaps = 8/320 (2%)
Strand = Plus / Plus
Query: 1 gaggaggagtaaaacagggtgacaatagtagcccaagaagtgcctccagcccaaggagta 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 gaggaggagtaaaacagggtgacaatagtagcccaagaagtggctccagcccaaggagta 260
Query: 61 gctccaaggatgttgcaggcttactgatggccccgcccc----atgaaaagccatgtgta 116
|||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 261 gctccaaggatgttgcaggcttactgatggcctgg----gaggatgaaaagccatgtgta 316
Query: 117 ggttgaacagctggataggacctcaggctcattgccagtgctgtatcctactccatgaaa 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ggttgaacagctggataggacctcaggctcattgccagtgctgtatcctactccatgaaa 376
Query: 177 acagccactgttagcatttcttctaggctctgcctcacagttacctggcaacagccaggt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 acagccactgttagcatttcttctaggctctgcctcacagttacctggcaacagccaggt 436
Query: 237 gtgcctgactcactataaaaggggctgtttgccccctcctctcttgctctcttccctctg 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gtgcctgactcactataaaaggggctgtttgccccctcctctcttgctctcttccctctg 496
Query: 297 gcccctctctccccatttcc 316
|||||||||||||||||||
Sbjct: 497 tcccctctctccccatttcc 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_b12.g1 MSMg01no151_b12.g1 CHROMAT_FILE:
MSMg01no151_b12.g1 PHD_FILE: MSMg01no151_b12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:49 2005
(341 letters)
>mm_chr13_56372664_56373404
Length = 741
Score = 648 bits (335), Expect = 0.0
Identities = 335/335 (100%)
Strand = Plus / Minus
Query: 6 tctgctagcagccttcagatgaagatgtagaactttcagctcctcctgcaccatgcctgc 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tctgctagcagccttcagatgaagatgtagaactttcagctcctcctgcaccatgcctgc 682
Query: 66 ctggatgctgccatgttcttgcctcgatgatactggactgagcctctgaacctataagcc 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctggatgctgccatgttcttgcctcgatgatactggactgagcctctgaacctataagcc 622
Query: 126 agctccaattaaatgctgtcctttataagacttgccttggtcatggtatctattcataga 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agctccaattaaatgctgtcctttataagacttgccttggtcatggtatctattcataga 562
Query: 186 agtaaaaccctaactaagacacccttcttgaaccatgggagctgccaggatggtctcctg 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtaaaaccctaactaagacacccttcttgaaccatgggagctgccaggatggtctcctg 502
Query: 246 aattccgggtacaggctgatgccacgaatccacattagctaccggattttcatcatttac 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aattccgggtacaggctgatgccacgaatccacattagctaccggattttcatcatttac 442
Query: 306 ctttatctttgaggtcatctgtcttgctaaggaag 340
|||||||||||||||||||||||||||||||||||
Sbjct: 441 ctttatctttgaggtcatctgtcttgctaaggaag 407
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
