Query= MSMg01no152_h09.b1 MSMg01no152_h09.b1 CHROMAT_FILE:
MSMg01no152_h09.b1 PHD_FILE: MSMg01no152_h09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:16:33 2005
(376 letters)
>mm_chr13_37562023_37562798
Length = 776
Score = 582 bits (301), Expect = e-170
Identities = 367/419 (87%), Gaps = 48/419 (11%)
Strand = Plus / Plus
Query: 5 ggaattcccagca-tttcctccactcctgagacatatgtaccttgggactgttaacctat 63
||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 ggaattcccagcagtttc-tccactcctgagacatatgtaccttgggactgttaacctat 217
Query: 64 gattacacagatggggctggggt------------------------------------- 86
|||||||||||||||||||||||
Sbjct: 218 gattacacagatggggctggggtatgagccagtgtgaaagctatccagcttgccagatgg 277
Query: 87 ---------gtgagccagtgtgaaagctatccagcttgccgtctaattgaaatgtccaac 137
|||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 278 ggctggggtgtgagccagtgtgaaagctatccagcttgccgtctaattgaaatgttcaac 337
Query: 138 agtttctgcttcctttccagctctgatcttaacacacacaaatgacaagatggattgagc 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 agtttctgcttcctttccagctctgatcttaacacacacaaatgacaagatggattgagc 397
Query: 198 ctggttccttatccccaactggggtagcaagcagggaagcacatgacgatgtgcaaagat 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ctggttccttatccccaactggggtagcaagcagggaagcacatgacgatgtgcaaagat 457
Query: 258 gagccgttggtctcccagtataacatgaactgattgaaccactgcctgcggtttgctgat 317
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gagccgttggtctcccagtaaaacatgaactgattgaaccactgcctgcggtttgctgat 517
Query: 318 caacaggcccattcacgggagtaaagtctgcccctgaataagctgaaggactggagata 376
||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 518 caacaggcccattcacgggagtaaagtctgcccctgaatgagccgaaggactggagata 576
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no152_h09.g1 MSMg01no152_h09.g1 CHROMAT_FILE:
MSMg01no152_h09.g1 PHD_FILE: MSMg01no152_h09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:16:33 2005
(291 letters)
>mm_chr13_37710382_37711072
Length = 691
Score = 532 bits (275), Expect = e-155
Identities = 287/291 (98%)
Strand = Plus / Minus
Query: 1 gagatctgcctgcaggtgcttcccaagtgctggggttacaggcgtacaccagtatgcctg 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 554 gagatctgcctgcaggtgcttcccaagtgctggggttacaggcgtaaaccagtatgcctg 495
Query: 61 gctgcttcccttgtgtttagacataagctctcccctggatccagggtctccctgactcta 120
||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 494 gctgcttcccttgtgtttagatataagctcttccctggatccagggtctccctgactcta 435
Query: 121 ctgatcagaatggccggccagtgagctgcaggctacacccctctccttgtgcaatgcact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ctgatcagaatggccggccagtgagctgcaggctacacccctctccttgtgcaatgcact 375
Query: 181 ggaatcacaggtgcatagagtaatacccgttttatttttatttttaaggtttcttttttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ggaatcacaggtgcatagagtaatacccgttttatttttatttttaaggtttcttttttt 315
Query: 241 tactttcgagtgtctctcttgtgtctctcacagtgtccacagatgccagaa 291
|||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 314 tactttcgagtgtctctcttgtgtctctcatagtgtccacagatgccagaa 264
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
