Query= MSMg01no153_p06.b1 MSMg01no153_p06.b1 CHROMAT_FILE:
MSMg01no153_p06.b1 PHD_FILE: MSMg01no153_p06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:27 2005
(513 letters)
>mm_chr13_53908750_53909663
Length = 914
Score = 932 bits (482), Expect = 0.0
Identities = 503/510 (98%), Gaps = 1/510 (0%)
Strand = Plus / Minus
Query: 5 gaattctccatgtcacgcagttctccatactatagttttgaaggaaacataatgtctgtg 64
|||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 595 gaattctccatggcaggcagttctccatactatagttttgaaggaaacataacgtctgtg 536
Query: 65 agatatggtttgctgggctgcgtatctttatgtgccagtatgcccctgcttttaattttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 agatatggtttgctgggctgcgtatctttatgtgccagtatgcccctgcttttaattttg 476
Query: 125 aggtgtttatcttagaaattcccaatgtgtcctctggcttccaatattggcaagccaaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 aggtgtttatcttagaaattcccaatgtgtcctctggcttccaatattggcaagccaaaa 416
Query: 185 tatttaggtaaattccctcc-aaaaactatgaaacccccagcacactgaaaacacacact 243
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tatttaggtaaattccctcctaaaaactatgaaacccccagcacactgaaaacacacact 356
Query: 244 tacttagaagcacagattggctgaaaagtagtgaggttatcttttctccaaagccgactg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tacttagaagcacagattggctgaaaagtagtgaggttatcttttctccaaagccgactg 296
Query: 304 caaccaaacggaagggaaagcaggtcacccctccccccattagacttcagatctcttgct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 caaccaaacggaagggaaagcaggtcacccctccccccattagacttcagatctcttgct 236
Query: 364 agtgaaccacacattgtttaggttgtcagtgttgttagctcgatgggagttacaatcatc 423
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 agtgaaggatacattgtttaggttgtcagtgttgttagctcgatgggagttacaatcatc 176
Query: 424 tgtgggatggacctctgagagcctctctgtgggggattttcttggttgtgctggttgggg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 tgtgggatggacctctgagagcctctctgtgggggattttcttggttgtgctggttgggg 116
Query: 484 gtgccaagtcttgtgtggcatcattcccag 513
||||||||||||||||||||||||||||||
Sbjct: 115 gtgccaagtcttgtgtggcatcattcccag 86
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 914
Length adjustment: 10
Effective length of query: 503
Effective length of database: 904
Effective search space: 454712
Effective search space used: 454712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_p06.g1 MSMg01no153_p06.g1 CHROMAT_FILE:
MSMg01no153_p06.g1 PHD_FILE: MSMg01no153_p06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:27 2005
(135 letters)
>mm_chr13_53758787_53759321
Length = 535
Score = 261 bits (135), Expect = 1e-74
Identities = 135/135 (100%)
Strand = Plus / Plus
Query: 1 atatttgaaagaatgagtgccacttgcctctggtgaaataaattcccacaggtcacacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atatttgaaagaatgagtgccacttgcctctggtgaaataaattcccacaggtcacacat 260
Query: 61 gttataaagacattggcaactgtgtgcttatctgcgttctgaaaggatggtaatgcttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttataaagacattggcaactgtgtgcttatctgcgttctgaaaggatggtaatgcttgt 320
Query: 121 tttacacgatccatc 135
|||||||||||||||
Sbjct: 321 tttacacgatccatc 335
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 135
Length of database: 535
Length adjustment: 8
Effective length of query: 127
Effective length of database: 527
Effective search space: 66929
Effective search space used: 66929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
