Query= MSMg01no158_f14.b1 MSMg01no158_f14.b1 CHROMAT_FILE:
MSMg01no158_f14.b1 PHD_FILE: MSMg01no158_f14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:52 2005
(311 letters)
>mm_chr13_64582363_64583073
Length = 711
Score = 586 bits (303), Expect = e-172
Identities = 306/307 (99%)
Strand = Plus / Plus
Query: 5 gaattcactttattttcagatcatattgttaaaattttcaatattcatactagttttatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactttattttcagatcatattgttaaaattttcaatattcatactagttttatt 264
Query: 65 tctgccagcatctctgtttgaaaaaaaaaaaacagagaaaggagatttcgtgaccaattt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tctgccagcatctctgtttgaaaaaaaaaaaacagagaaaggagatttcgtgaccaattt 324
Query: 125 ctggagttgtatggaaccagatttcattaaggtcattgcctcaagcaagctcagagaaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctggagttgtatggaaccagatttcattaaggtcattgcctcaagcaagctcagagaaaa 384
Query: 185 catttagatttcaagatgaggagagaatccagaaccagattatactttgtggatcttgga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 catttagatttcaagatgaggagagaatccagaaccagattatactttgtggatcttgga 444
Query: 245 aacccggagaggggtgctaattcaaagagtttttttaatataaatcaacccaagaatccc 304
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 445 aacccggagaggggtgctaattcaaagagcttttttaatataaatcaacccaagaatccc 504
Query: 305 acccctg 311
|||||||
Sbjct: 505 acccctg 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space: 212004
Effective search space used: 212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no158_f14.g1 MSMg01no158_f14.g1 CHROMAT_FILE:
MSMg01no158_f14.g1 PHD_FILE: MSMg01no158_f14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:52 2005
(282 letters)
>mm_chr13_64737793_64738475
Length = 683
Score = 524 bits (271), Expect = e-153
Identities = 280/283 (98%), Gaps = 1/283 (0%)
Strand = Plus / Minus
Query: 1 tttttgctatttagctttgaggtctcccaaagagcctcaaatctgtgaaatcagtctcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tttttgctatttagctttgaggtctcccaaagagcctcaaatctgtgaaatcagtctcaa 424
Query: 61 aatgggctcatagacaacaatgagcctgcagtacagagaatcacttaatgagacatgcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 aatgggctcatagacaacaatgagcctgcagtacagagaatcacttaatgagacatgcca 364
Query: 121 acaagtcctttgtttcattaatgccttgtggttttgtcatctccggtgtttgtcactttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 acaagtcctttgtttcattaatgccttgtggttttgtcatctccggtgtttgtcactttg 304
Query: 181 ggaaatgagtttttatccagtttataatcctatttgcccttcttagtttttcattcaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ggaaatgagtttttatccagtttataatcctatttgcccttcttagtttttcattcaagc 244
Query: 241 aaaatataaaaaaaa-taacaacacagcagaaacactgtttag 282
|||| | |||||||| |||||||||||||||||||||||||||
Sbjct: 243 aaaaaaaaaaaaaaaataacaacacagcagaaacactgtttag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 683
Length adjustment: 9
Effective length of query: 273
Effective length of database: 674
Effective search space: 184002
Effective search space used: 184002
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
