Query= MSMg01no160_g12.b1 MSMg01no160_g12.b1 CHROMAT_FILE:
MSMg01no160_g12.b1 PHD_FILE: MSMg01no160_g12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:26:21 2005
(273 letters)
>mm_chr13_99635481_99636153
Length = 673
Score = 453 bits (234), Expect = e-132
Identities = 246/250 (98%)
Strand = Plus / Plus
Query: 21 tttcccattatctctgggactagaatcaaagtcaattgatgtatttttagtttactccct 80
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 221 tttcccattatctctgggactagaatcaaagtcaattgatgtatttttagtacactctct 280
Query: 81 cttttggactgaaacacactgcatggcaagtatggaaatagtcacaggcccgctctacta 140
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 281 cttttggactgaaacacactgcatggcaagtatggaaacagtcacaggcccgctctacta 340
Query: 141 cttgtcaaatactatgtgtgtactgctcataaagtgttacatatattataaaatcaggat 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 cttgtcaaatactatgtgtgtactgctcataaagtgttacatatattataaaatcaggat 400
Query: 201 gcctaggcgtggcctacaccaagtgataaaatgttaaagtttctaattagcttcaaacaa 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gcctaggcgtggcctacaccaagtgataaaatgttaaagtttctaattagcttcaaacaa 460
Query: 261 gcagctgtga 270
||||||||||
Sbjct: 461 gcagctgtga 470
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 673
Length adjustment: 9
Effective length of query: 264
Effective length of database: 664
Effective search space: 175296
Effective search space used: 175296
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no160_g12.g1 MSMg01no160_g12.g1 CHROMAT_FILE:
MSMg01no160_g12.g1 PHD_FILE: MSMg01no160_g12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:26:21 2005
(268 letters)
>mm_chr13_99810888_99811555
Length = 668
Score = 474 bits (245), Expect = e-138
Identities = 263/269 (97%), Gaps = 2/269 (0%)
Strand = Plus / Minus
Query: 1 caacatttgagtcttgggaagggtcaactgcctctggctcaagagctcatctgtttacct 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 468 caacatttgagtcttgggaagggtcaactgcctctggctcaagagctcacctgtttacct 409
Query: 61 ctagataggagtgagggggccaact-aaaaccacagagcatcctggacagttcactgttc 119
|||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 408 ctagataggagtga-gggaccaactaaaaaccacagagcatcctggacagttcactgttc 350
Query: 120 ctgcttttctatgagtcccagacccccaaggtgacccctatctttctcctagtcagtgtg 179
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ctgcctttctatgagtcccagacccccaaggtgacccctatctttctcctagtcagtgtg 290
Query: 180 ctagaaaccatttgaagcatcccagggtaatgtagcttattcaatcccacttggtgcaga 239
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 289 ctagaaaccatttgaagcatcccagggcaatgtagcttattcaatcccacttggtgcaga 230
Query: 240 ggtctttgggggcgggggaaggggaggga 268
|||||||||||||||||||||||||||||
Sbjct: 229 ggtctttgggggcgggggaaggggaggga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 268
Length of database: 668
Length adjustment: 9
Effective length of query: 259
Effective length of database: 659
Effective search space: 170681
Effective search space used: 170681
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
