MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-161K07
Chromosome	13 (Build37)
Map Location	68,854,573 - 69,053,787
singlet/doublet	doublet
Overlap gene	Adcy2, LOC666205
Upstream gene	Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272, LOC100042223, Mtrr, LOC100042233, Fastkd3, 1700001L19Rik
Downstream gene	LOC218332, Pols, A530095I07Rik, Srd5a1, Nsun2, LOC100042260, 3110006E14Rik, 4930547H16Rik, Med10
Link	Open Mouse BAC browser

Click to get alignment info.

name	Zfp85-rs1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22746 MGI:107767
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC674597 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:674597
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 2029 ESTs, 2 Proteins pseudo : _no_value

name	Zfp273 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212569 MGI:3036278
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC048507 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:408058 MGI:3040680
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666185 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 31 ESTs

name	LOC100042687 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042687
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 31 ESTs

name	LOC100042692 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042692
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 31 ESTs

name	LOC674779 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:674779
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs

name	LOC677603 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:677603
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein

name	LOC100042124 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042124
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs

name	LOC666222 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666222
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 30 ESTs

name	AA414992 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:102402 MGI:2142939
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs

name	LOC666238 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666238
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein

name	EG666245 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666245 MGI:3648435
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 30 ESTs

name	EG666272 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666272 MGI:3645625
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 30 ESTs

name	LOC100042223 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042223
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Mtrr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210009 MGI:1891037
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042233 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042233
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	Fastkd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69577 MGI:1916827
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700001L19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69315 MGI:1916565
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 24 ESTs, 1 Protein

name	Adcy2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210044 MGI:99676
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666205 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666205
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 51 ESTs, 4 Proteins pseudo : _no_value

name	LOC218332 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:218332
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 Proteins pseudo : _no_value

name	Pols (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210106 MGI:2682295
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A530095I07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210373 MGI:2685376
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Srd5a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78925 MGI:98400
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nsun2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:28114 MGI:107252
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042260 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042260
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	3110006E14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76980 MGI:1924230
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 92 ESTs, 8 Proteins

name	4930547H16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75278 MGI:1922528
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Med10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:28077 MGI:106331
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp85-rs1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892769 GeneID:22746 MGI:107767
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 85, related sequence 1 transcript_id : NM_001001130.2

name	Zfp273 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802315 GeneID:212569 MGI:3036278
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 273 transcript_id : NM_198322.2

name	BC048507 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802635 GeneID:408058 MGI:3040680
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC048507 transcript_id : NM_001001185.2

name	LOC666185 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94395281 GeneID:666185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 31 ESTs product : similar to CG32602-PA transcript_id : XM_982175.1

name	LOC100042687 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264352 GeneID:100042687
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 31 ESTs product : similar to CG32602-PA transcript_id : XM_001478764.1

name	LOC100042692 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264354 GeneID:100042692
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 31 ESTs product : similar to CG32602-PA transcript_id : XM_001478772.1

name	LOC674779 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264356 GeneID:674779
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs product : similar to CG32602-PA transcript_id : XM_001478781.1

name	LOC677603 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264296 GeneID:677603
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein product : similar to CG32602-PA transcript_id : XM_001477594.1

name	LOC100042124 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264298 GeneID:100042124
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs product : similar to pol protein transcript_id : XM_001477610.1

name	LOC666222 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94395283 GeneID:666222
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 30 ESTs product : similar to CG32602-PA transcript_id : XM_982378.1

name	AA414992 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264358 GeneID:102402 MGI:2142939
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs product : expressed sequence AA414992 transcript_id : XM_001478791.1

name	LOC666238 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94395285 GeneID:666238
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein product : similar to CG32602-PA transcript_id : XM_982514.1

name	EG666245 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94395287 GeneID:666245 MGI:3648435
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 30 ESTs product : predicted gene, EG666245 transcript_id : XM_982548.1

name	EG666272 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94395296 GeneID:666272 MGI:3645625
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 30 ESTs product : predicted gene, EG666272 transcript_id : XM_982690.1

name	Mtrr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372988 GeneID:210009 MGI:1891037
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5-methyltetrahydrofolate-homocysteine methyltransferase reductase transcript_id : NM_172480.2

name	LOC100042233 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264302 GeneID:100042233
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : hypothetical protein LOC100042233 transcript_id : XM_001477772.1

name	Fastkd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368898 GeneID:69577 MGI:1916827
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : FAST kinase domains 3 transcript_id : NM_027123.4

name	1700001L19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264361 GeneID:69315 MGI:1916565
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 24 ESTs, 1 Protein product : RIKEN cDNA 1700001L19 gene transcript_id : XM_127414.8

name	Adcy2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124244091 GeneID:210044 MGI:99676
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adenylate cyclase 2 transcript_id : NM_153534.2

name	Pols (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38348447 GeneID:210106 MGI:2682295
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polymerase (DNA directed) sigma transcript_id : NM_198600.1

name	Srd5a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87044894 GeneID:78925 MGI:98400
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : steroid 5 alpha-reductase 1 transcript_id : NM_175283.3

name	Nsun2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802364 GeneID:28114 MGI:107252
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NOL1/NOP2/Sun domain family 2 transcript_id : NM_145354.3

name	3110006E14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264307 GeneID:76980 MGI:1924230
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 92 ESTs, 8 Proteins product : RIKEN cDNA 3110006E14 gene transcript_id : XM_127466.9

name	4930547H16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264310 GeneID:75278 MGI:1922528
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930547H16 gene transcript_id : XM_001477863.1

name	Med10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374083 GeneID:28077 MGI:106331
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mediator of RNA polymerase II transcription, subunit 10 homolog (NUT2, S. cerevisiae) transcript_id : NM_138596.2

name	Zfp85-rs1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47564117 GeneID:22746 MGI:107767
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : KRAB-zinc finger protein 71; regulator of sex-limitation candidate 2 product : zinc finger protein 85, related sequence 1 protein_id : NP_001001130.1

name	Zfp273 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46810305 GeneID:212569 MGI:3036278
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : regulator of sex-limitation candidate 1 protein_id : NP_938081.1

name	BC048507 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47564127 GeneID:408058 MGI:3040680
definition	GO_component : GO:0005875 - microtubule associated complex [Evidence IEA] GO_function : GO:0003777 - microtubule motor activity [Evidence IEA] GO_process : GO:0007017 - microtubule-based process [Evidence IEA] codon_start : 1 product : cDNA sequence BC048507 protein_id : NP_001001185.1

name	LOC666185 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94395282 GeneID:666185
definition	codon_start : 1 product : hypothetical protein protein_id : XP_987269.1

name	LOC100042687 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264353 GeneID:100042687
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478814.1

name	LOC100042692 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264355 GeneID:100042692
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478822.1

name	LOC674779 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264357 GeneID:674779
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478831.1

name	LOC677603 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264297 GeneID:677603
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477644.1

name	LOC100042124 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264299 GeneID:100042124
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001477660.1

name	LOC666222 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94395284 GeneID:666222
definition	codon_start : 1 product : hypothetical protein protein_id : XP_987472.1

name	AA414992 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149264359 GeneID:102402 MGI:2142939
definition	codon_start : 1 product : hypothetical protein LOC102402 protein_id : XP_001478841.1

name	LOC666238 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94395286 GeneID:666238
definition	codon_start : 1 product : hypothetical protein protein_id : XP_987608.1

name	EG666245 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94395288 GeneID:666245 MGI:3648435
definition	codon_start : 1 product : hypothetical protein protein_id : XP_987642.1

name	EG666272 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94395297 GeneID:666272 MGI:3645625
definition	codon_start : 1 product : hypothetical protein protein_id : XP_987784.1

name	Mtrr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369650 CCDS:CCDS26620.1 GeneID:210009 MGI:1891037
definition	GO_function : GO:0047138 - aquacobalamin reductase activity [Evidence ISS]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0050660 - FAD binding [Evidence ISS]; GO:0010181 - FMN binding [Evidence ISS] [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0030586 - [methionine synthase] reductase activity [Evidence ISS] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0050821 - protein stabilization [Evidence ISS] codon_start : 1 product : 5-methyltetrahydrofolate-homocysteine methyltransferase reductase protein_id : NP_766068.1

name	LOC100042233 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264303 GeneID:100042233
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477822.1

name	Fastkd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:128485706 GeneID:69577 MGI:1916827
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA] codon_start : 1 product : FAST kinase domains 3 protein_id : NP_081399.3

name	1700001L19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20908537 GeneID:69315 MGI:1916565
definition	codon_start : 1 product : hypothetical protein LOC69315 protein_id : XP_127414.1

name	Adcy2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124244092 GeneID:210044 MGI:99676
definition	GO_component : GO:0030425 - dendrite [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IDA]; GO:0005886 - plasma membrane [Evidence TAS] GO_function : GO:0004016 - adenylate cyclase activity [Evidence TAS]; GO:0016829 - lyase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016849 - phosphorus-oxygen lyase activity [Evidence IEA] GO_process : GO:0007190 - adenylate cyclase activation [Evidence TAS]; GO:0006171 - cAMP biosynthesis [Evidence TAS]; GO:0009190 - cyclic nucleotide biosynthesis [Evidence IEA]; GO:0007188 - G-protein signaling, coupled to cAMP nucleotide second messenger [Evidence TAS]; GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 product : adenylate cyclase 2 protein_id : NP_705762.2

name	Pols (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38348448 CCDS:CCDS26622.1 GeneID:210106 MGI:2682295
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : DNA polymerase sigma protein_id : NP_941002.1

name	Srd5a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87044895 CCDS:CCDS26624.1 GeneID:78925 MGI:98400
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0003865 - 3-oxo-5-alpha-steroid 4-dehydrogenase activity [Evidence IMP] GO_process : GO:0006702 - androgen biosynthesis [Evidence IMP] codon_start : 1 product : steroid 5 alpha-reductase 1 protein_id : NP_780492.2

name	Nsun2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542461 GeneID:28114 MGI:107252
definition	codon_start : 1 note : Myc-induced SUN domain containing protein product : NOL1/NOP2/Sun domain family 2 protein_id : NP_663329.2

name	3110006E14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149264308 GeneID:76980 MGI:1924230
definition	codon_start : 1 product : hypothetical protein LOC76980 protein_id : XP_127466.4

name	4930547H16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149264311 GeneID:75278 MGI:1922528
definition	codon_start : 1 product : hypothetical protein LOC75278 protein_id : XP_001477913.1

name	Med10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20070410 CCDS:CCDS26625.1 GeneID:28077 MGI:106331
definition	codon_start : 1 product : mediator of RNA polymerase II transcription, subunit 10 homolog (NUT2, S. cerevisiae) protein_id : NP_613062.1

name	LOC100042223 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042223
definition	number : 1 pseudo : _no_value

name	LOC100042223 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042223
definition	number : 2 pseudo : _no_value

name	LOC100042223 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042223
definition	number : 3 pseudo : _no_value

name	LOC100042223 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042223
definition	number : 4 pseudo : _no_value

name	LOC218332 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:218332
definition	number : 1 pseudo : _no_value

name	LOC100042260 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042260
definition	number : 1 pseudo : _no_value

name	LOC674597 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264346 GeneID:674597
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 2029 ESTs, 2 Proteins product : similar to Acidic ribosomal phosphoprotein P0 pseudo : _no_value transcript_id : XR_033778.1

name	LOC666205 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264362 GeneID:666205
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 51 ESTs, 4 Proteins product : similar to farnesyl pyrophosphate synthase pseudo : _no_value transcript_id : XR_033933.1

name	A530095I07Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149264364 GeneID:210373 MGI:2685376
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA A530095I07 gene transcript_id : XR_035386.1

clone name	MSMg01-351F07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-485A07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-403H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467B09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-150P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140I09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-438N03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-084O10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-262C01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-325M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204K14
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-161K07.T7 (MSMg01no161_k07.b1)	MSMg01-161K07.TJ (MSMg01no161_k07.g1)
ACC	AG360995	AG360996
length	1,152	1,254
length of high quality (start - end)	414 (41 - 454)	167 (103 - 269)
definition	CHROMAT_FILE: MSMg01no161_k07.b1 PHD_FILE: MSMg01no161_k07.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:28:29 2005	CHROMAT_FILE: MSMg01no161_k07.g1 PHD_FILE: MSMg01no161_k07.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:28:29 2005
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(68,854,573 - 68,854,979)	(69,053,621 - 69,053,787)
sequence	NNCCTCATTGGGCGCTATXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC AGAATCAATAGTGTGTTCCAGAATAGCTATCATTAAAAGTAGATTGGACA TCTGCACTGCTTCACGAAAGAAGGTTAAATTACAGGTTTCAAAAACAGAT GTTGTTGGTATTTCTGATACTGTTAGCAGAGGTAGAATTTGATCTATCTT ATAAGACTATTGTAGGACTCAACTCCTGATTTTCTTTCCACTTTTAAAAG TTCACTCTTATTTATTTCAAATTTTTAAATTTCACTCTTACTTTATTTAC AAATTTCTATTTTGGGGAAGCAGTTTTTAAATTTTTAAATTAGGAATCAC AGTTGATTCCTATGAAAATGCCCAGAAAATAAAAATAAATTTTATTTTGT TTATTATTTTTATTACATGTGAATTGATTTTGTGGGCATGCGTGTGTGTG TTTTTTTTTCCCCCCCCCCATGNACTCGTGCTCCACGTAAACAAAGAGAC ACACNGGCCACTGCTGTTGTGTGGATGTTAGAGGATAACTTAGGGAGCTC AATTCTTACTGGTCATGGAGACTGAATTTAGATCGCCAGGTTTGGTGGCC ATCTCCTTTACCAGTTTTTCTACCTTGTTGGCCCACAAACAAATTTTATC CATACTTTCTATTAAAACTGTATTTATCAGAATATGTATTTGTATAGCAC TTGCAGGTAAATTACCCCCCATTTTTTTTCCTTTATCAAAGAGCAAAATC TAATTTTAAAAAATGCTTCCAGAATACAATAATTTGTAAATAAAATGAGA ATGAACTTTAAAAACTTTTATAATGCATTTTTCTTTTTTATTGCCGAGGG GTCCTACTATGTCTGTTTTTTATGCTCCCCTTTCCGTTCTGTATGCCCCC TGTATGAACTTTTTTGTCTTGGTTTATTTAAGTCTCTTTTGTTATTTCTC TCATCTATAAAATTCTTTTTGTTAAAATTTATTCTCTGTCTATATCAATC CTCTTTTTCTCTTTTTTTTTTTAAATATTGGCTGTTTTTGGCTTTTTTTT TTTCTTGTCCTATTTTTTTTATCTTTTCCCCTTCTTTTGTCCTACTTAAA ATTTTTTTTTCTCTTTATTTTACTCTCTTATACCCCTACTTATCCTCACC TA	NNTTAAGAAGGTAGCTGGGGCGCCXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXCAGGAATATTGCATAGAACAGAGGAGAAGATG GTGACTACCAAGCTGAGAGAAGTAAAATACCTACTCCAGATGTTGGGACA CAGCTGTATAACTCCTTCTAAAGGTTATGGAACACTGAGGAAGATGGAGT TGGACAAATGTAAAAACCAAATGATGAAAAATTACGTAGGGAAAGGTCTT TTGGACATAATAAGGCCATTGCACTAAGGGGCTCACTACAGCCATGGGGA GCTGTTTGACTCACTACTGCTATAATGATTGGCTGGACTCACTACTGCCA TAGGGAGCTTCTGGACTCACTACTGCCATGATGATCTGCTGGACTCACTA TTTTTTTGGTGAGCTGAGCACATTGTCATCCTTTTCTTGTGGATGGGGAA TTTTTTTCCCCCCCCCCCCTCCCNTTCCCTAAGCGCTGAAAAAAAAAAGG GATTGCTAGATCAGGGATTTTAGCTTTATTAAGTGCTGTAGGGATAGATA AGTTGCCATGCTCCTGTAAGTGTCTCTCCTCCTCGCACATGCCCACAATG CTGGGGCAAGCAACTCTTATTTAACTTAGGGAGTCACACAAACAAGAGTC ATGAAAGTCAAAGGGAGGGGTGAGAAAGGTCTTGAGAGGAAAGGGGGGAG AGGATAAAAGACGTTAGCGAGTAGATATTTTTGTTCTTTTTCATGTTATT ATTTGTTTCCTGTCTTTATTTTAATTTCCTTTTTTTTTAATGTTTATATC TGTTTCCACAATTGTATTTTTATATTTCTTACCATATATTCCTTCCTTCT GTTTTACTAAATTGCTTTATTCATTATAATTATAATAAATTCTTTATACT AGTCTTTTCTCTTTTTTCTTTTTTCTTACTATACTCCTTTGTTTTTTCTT ATTATTATTTTTATCTTTCTTTTTCTTTTCTTTTTTTTTCTTTTTTATTT TTTTTTTTATCCTTTTTTCTTCTTTATTCTATTTTTTATGTTTTTTTTTT TTCTTTTTCTTTTTTCTACTTCCTATTTCTATCATTTCTTTTATCTAGCT CTCTTTATATTTTTTTTTCTCTCTTATCTTTTCTTTTAATTCTACTTCCA GTTTCTCTCGATTTTCTATCTCTTTTCTTATTTATATACTTCTTCTCCTT TTTTTTATTCTAAATCACTTTAATCTTTATCTATATTATATTGACTTTGT ATCT
quality values	Open. Hide. 0 0 3 6 6 6 8 8 8 8 8 16 16 16 12 12 10 10 9 16 17 19 9 8 8 8 12 10 19 19 42 43 37 37 37 42 42 42 42 42 53 48 68 68 47 47 51 47 51 50 48 48 50 42 47 41 41 41 40 50 50 50 51 51 68 68 42 42 30 28 28 32 38 42 47 47 47 50 51 51 51 51 51 51 51 68 68 68 57 57 39 37 32 43 43 35 50 50 57 57 57 57 57 57 68 68 68 50 50 50 50 50 50 57 57 57 57 68 68 68 68 68 68 68 68 57 38 30 16 14 19 24 13 38 38 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 68 68 57 57 57 52 52 52 52 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 68 68 68 68 68 68 68 68 68 68 68 68 57 50 50 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 30 30 18 15 10 10 10 19 26 59 59 59 59 59 59 59 59 57 57 57 57 57 57 57 57 50 50 53 53 53 57 59 59 59 59 59 59 59 59 59 57 53 53 50 48 46 47 34 34 21 21 13 14 12 9 8 8 8 8 10 8 8 8 11 12 14 14 17 17 11 9 9 3 0 3 25 25 39 59 41 41 41 47 39 37 25 18 10 11 11 13 12 10 9 17 11 10 10 10 10 9 11 11 12 3 0 3 27 23 37 37 37 37 35 35 37 39 43 48 48 48 59 59 43 37 37 40 37 39 59 47 59 43 43 43 48 48 48 48 48 40 43 42 48 32 34 31 39 39 43 59 43 33 33 39 40 43 59 47 47 43 39 36 33 33 33 33 33 33 37 37 34 34 34 37 25 31 37 59 34 32 28 19 27 21 23 23 32 32 40 43 43 57 43 59 47 47 37 37 35 35 39 40 42 39 43 43 59 59 57 48 48 48 59 59 59 59 59 59 59 43 43 39 39 39 39 39 35 32 30 37 37 42 41 41 37 37 31 31 37 32 33 31 33 33 33 37 48 48 48 48 43 43 41 39 39 39 39 39 35 35 35 34 34 48 48 48 48 39 38 36 36 33 33 39 37 37 33 30 25 25 29 24 28 30 29 30 30 30 30 29 33 30 30 39 33 31 28 28 28 26 32 28 23 14 28 28 37 30 25 19 22 22 25 29 30 33 33 48 48 48 48 57 57 50 50 50 47 47 37 33 33 28 24 18 12 12 18 9 9 11 22 19 28 28 34 30 24 24 16 18 18 31 31 38 36 36 32 32 30 37 29 19 19 11 10 10 9 9 13 12 12 21 17 14 14 12 10 10 9 9 9 9 11 23 19 17 13 10 10 8 8 10 8 14 12 16 12 10 12 10 12 12 19 19 23 23 22 25 15 11 11 16 12 12 15 24 27 23 13 10 8 10 6 6 8 8 9 12 15 10 8 8 6 6 8 8 19 15 11 10 9 9 8 8 9 8 8 8 8 8 8 10 10 10 8 9 9 9 9 9 9 9 9 8 8 8 8 10 13 11 6 6 8 8 9 10 9 8 8 8 8 8 8 8 10 11 9 10 9 9 8 8 8 8 8 8 8 8 10 10 10 11 8 8 8 8 8 8 8 8 10 8 10 9 9 9 10 8 8 6 6 8 8 11 13 15 11 11 10 9 8 8 6 6 8 8 10 10 10 10 10 9 9 9 11 8 8 8 8 6 7 6 6 8 18 11 11 8 8 8 8 8 10 15 19 21 10 12 12 9 8 8 6 6 8 8 9 10 9 9 9 9 9 11 11 12 8 8 8 10 10 10 8 8 8 6 6 8 8 8 13 11 8 8 9 15 13 10 9 9 13 13 23 23 18 15 12 12 11 12 12 11 11 9 12 10 10 8 8 8 12 8 8 8 8 8 8 8 6 6 8 8 10 10 13 10 10 15 23 36 19 15 8 10 11 8 8 8 8 8 8 8 8 10 8 10 8 8 6 6 6 8 8 10 12 12 7 6 8 8 8 8 8 8 8 13 15 8 8 8 8 6 6 6 8 8 9 9 10 10 10 11 11 11 11 8 7 7 9 9 9 7 7 8 8 8 10 10 10 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 16 12 10 11 10 9 9 9 10 9 10 10 10 9 9 9 9 9	Open. Hide. 0 0 3 6 6 6 6 8 8 6 6 6 6 7 8 6 6 6 6 8 8 13 9 8 9 8 9 9 15 16 8 8 9 10 21 19 29 16 24 15 24 21 29 31 34 28 34 31 36 31 34 33 40 36 43 43 57 43 43 32 31 20 18 17 17 11 19 16 21 18 17 19 19 25 25 28 25 24 15 24 16 19 17 19 19 26 26 14 14 14 24 24 15 15 15 12 12 12 18 15 13 12 14 24 22 35 32 30 32 24 24 11 13 11 19 11 15 15 32 32 37 32 36 37 43 28 24 16 14 16 16 28 28 24 24 24 24 12 12 12 18 18 24 19 18 13 13 17 32 32 32 27 13 13 12 12 15 16 24 34 24 24 27 39 39 39 23 23 23 23 16 24 29 43 32 35 24 24 20 27 27 35 24 20 17 20 35 35 20 18 18 14 14 14 18 16 28 23 43 23 35 20 23 23 43 33 26 13 13 12 27 33 20 20 20 35 24 43 20 26 26 27 27 31 35 35 35 26 31 31 35 35 43 43 31 27 22 16 14 14 15 38 23 26 26 27 26 26 27 38 21 21 12 15 15 23 23 23 33 33 33 33 35 35 43 43 18 18 13 24 12 24 18 22 21 16 11 11 13 27 15 20 20 23 27 27 27 27 32 32 32 32 21 13 13 12 16 15 16 24 15 14 14 21 38 33 33 33 27 28 28 32 32 28 19 24 12 12 12 24 24 42 32 32 17 17 17 30 20 19 12 15 11 11 12 24 24 30 30 25 30 28 24 24 17 17 15 28 21 25 23 20 20 20 18 30 20 25 19 30 19 20 18 22 22 28 28 23 26 23 19 21 14 17 15 28 19 14 14 19 19 23 25 25 28 15 15 13 14 14 14 18 18 28 21 18 12 12 11 10 9 10 9 10 10 10 10 12 12 12 17 24 18 19 13 24 13 24 22 31 21 24 15 19 12 21 19 18 18 28 28 39 59 39 34 34 19 19 11 12 12 18 12 15 15 22 15 9 7 8 7 8 9 14 21 18 11 11 11 14 14 20 34 23 23 23 19 17 10 11 11 12 3 0 3 27 27 20 20 15 15 11 11 9 12 12 12 13 8 8 9 11 11 15 15 11 11 10 10 10 15 16 15 18 12 21 21 23 23 28 34 34 47 36 33 25 25 27 27 32 30 20 17 17 18 29 28 39 41 41 18 28 14 14 14 21 21 15 24 21 20 20 20 31 31 23 23 23 36 36 32 32 23 28 28 32 32 13 13 13 24 27 41 20 20 13 24 24 32 13 13 12 12 12 24 24 37 44 44 44 43 43 36 36 27 27 18 24 13 18 16 34 34 48 43 32 24 15 18 12 15 15 24 34 30 41 36 23 32 23 36 24 30 19 19 30 27 35 32 36 32 32 31 20 20 18 30 22 40 37 30 30 25 25 17 17 17 28 28 39 37 37 28 28 14 14 14 19 18 13 11 11 19 19 22 20 18 24 19 18 17 17 26 17 17 17 30 25 21 15 14 18 14 26 22 31 32 28 21 14 14 15 22 20 11 11 11 15 15 28 26 29 28 23 18 26 12 12 11 12 12 15 12 12 11 12 18 19 11 11 11 11 9 10 10 8 8 8 8 10 10 10 8 8 6 6 6 10 8 10 8 8 6 6 8 6 8 8 9 13 18 13 8 10 10 8 7 7 8 8 8 9 10 8 11 14 9 9 9 9 8 8 8 8 8 8 8 8 8 8 10 11 11 11 11 10 10 10 10 10 15 15 14 14 12 14 12 9 9 9 9 9 8 8 8 8 8 8 8 8 8 8 8 10 10 8 8 8 8 8 6 6 8 8 8 10 8 8 10 12 12 8 8 8 8 12 9 13 8 8 6 8 8 8 10 10 10 13 10 9 9 8 8 8 8 6 6 8 8 10 10 10 9 9 9 9 8 11 10 9 9 13 18 16 18 18 11 10 8 8 8 8 8 8 8 8 8 9 9 8 8 8 8 8 10 9 8 8 8 8 8 8 8 10 10 8 10 8 10 8 8 8 6 7 10 8 10 8 6 6 6 8 8 11 16 16 11 15 11 12 10 9 8 8 7 6 8 8 10 10 10 10 10 12 15 12 11 11 10 8 8 8 10 10 12 16 16 10 9 9 9 9 10 19 8 8 6 6 8 8 10 10 12 10 11 11 15 12 9 9 9 8 10 6 6 8 10 12 10 10 10 10 8 12 8 8 8 8 8 8 8 8 8 8 10 8 8 8 10 8 9 11 12 20 17 9 9 9 10 9 10 9 12 14 16 12 15 8 8 10 8 6 6 10 6 9 8 8 8 8 11 8 8 9 10 10 10 8 9 9 9 10 12 13 13 15 11 11 11 18 16 12 12 9 9 8 8 8 8 8 10 19 12 13 6 6 8 8 8 10 7 7 8 8 8 8 8 8 11 8 12 8 8 8 8 9 9 10 10 12 8 8 8 8 8 8 8 8 8 8 10 10 10 8 8 6 7 11 10 8 9 9 10 16 15 15 19 15 15 9 9 9 9 9 9 9 9 12 11 6 6 7 6 8 8 10 9 10 10 11 10 8 8 6 6 6 6 8 6 6 8 8 8 8 8 8 8 8 8 8 8 10 10 8 8 6 6 8 6 6 6 9 10 12 20 22 19 12 7 6 8 8 10 8 12 10 8 9 9 12 11 8 8 6 6 6 6 8 6 9 19 18 22 13 8 8 6 6 8 7 7 10 8 10 9 11 9 9 10 13 8 8 6 8 8 8 8 6 6 6 6 8 8 10 12 10 10 8 8 8 8 8 8 13 10 11 10 8 8 6 6 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no161_k07.b1 MSMg01no161_k07.b1 CHROMAT_FILE:
MSMg01no161_k07.b1 PHD_FILE: MSMg01no161_k07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:28:29 2005
         (414 letters)



>mm_chr13_68854369_68855182
          Length = 814

 Score =  772 bits (399), Expect = 0.0
 Identities = 405/407 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcagaatcaatagtgtgttccagaatagctatcattaaaagtagattggacatctg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagaatcaatagtgtgttccagaatagctatcattaaaagtagattggacatctg 264

                                                                       
Query: 65  cactgcttcacgaaagaaggttaaattacaggtttcaaaaacagatgttgttggtatttc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cactgcttcacgaaagaaggttaaattacaggtttcaaaaacagatgttgttggtatttc 324

                                                                       
Query: 125 tgatactgttagcagaggtagaatttgatctatcttataagactattgtaggactcaact 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgatactgttagcagaggtagaatttgatctatcttataagactattgtaggactcaact 384

                                                                       
Query: 185 cctgattttctttccacttttaaaagttcactcttatttatttcaaatttttaaatttca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cctgattttctttccacttttaaaagttcactcttatttatttcaaatttttaaatttca 444

                                                                       
Query: 245 ctcttactttatttacaaatttctattttggggaagcagtttttaaatttttaaattagg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctcttactttatttacaaatttctattttggggaagcagtttttaaatttttaaattagg 504

                                                                       
Query: 305 aatcacagttgattcctatgaaaatgcccagaaaataaaaataaattttattttgtttat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aatcacagttgattcctatgaaaatgcccagaaaataaaaataaattttattttgtttat 564

                                                          
Query: 365 tatttttattacatgtgaattgattttgtgggcatgcgtgtgtgtgt 411
            |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 565 aatttttattacatgtgaattgattttgtgggcatgcatgtgtgtgt 611


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space:   326025
Effective search space used:   326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no161_k07.g1 MSMg01no161_k07.g1 CHROMAT_FILE:
MSMg01no161_k07.g1 PHD_FILE: MSMg01no161_k07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:28:29 2005
         (167 letters)



>mm_chr13_69053421_69053987
          Length = 567

 Score =  284 bits (147), Expect = 2e-81
 Identities = 162/167 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   gactaccaagctgagagaagtaaaatacctactccagatgttgggacacagctgtataac 60
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 367 gactaccaagctgagagaagtaaaataactactccagatgttgggacacagctgtataac 308

                                                                       
Query: 61  tccttctaaaggttatggaacactgaggaagatggagttggacaaatgtaaaaaccaaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 307 tccttctaaaggttatggaacactgaggaagatggagttggacaaatgtaagaaccagat 248

                                                          
Query: 121 gatgaaaaattacgtagggaaaggtcttttggacataataaggccat 167
           |||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 247 gatgaagaattacgtagtgaaaggtcttttggacataataaggccat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 167
Length of database: 567
Length adjustment: 8
Effective length of query: 159
Effective length of database: 559
Effective search space:    88881
Effective search space used:    88881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information