Query= MSMg01no162_b08.b1 MSMg01no162_b08.b1 CHROMAT_FILE:
MSMg01no162_b08.b1 PHD_FILE: MSMg01no162_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:22 2005
(319 letters)
>mm_chr13_63408480_63409198
Length = 719
Score = 582 bits (301), Expect = e-171
Identities = 314/321 (97%), Gaps = 6/321 (1%)
Strand = Plus / Minus
Query: 5 gaattctaggctgtgactattttacc-caataaaaccattgagccgggcgtggtggcaca 63
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 711 gaattctaggctgtgactattttaccacaataaaaccattgagccgggcgtggtggcaca 652
Query: 64 cgcctttaatcccagcactcgggaggcagaggtaggcggatttctgagttcgaggccagc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 cgcctttaatcccagcactcgggaggcagaggtaggcggatttctgagttcgaggccagc 592
Query: 124 ctggtctacaaagtgagtgccaggacagccagggctacacagagaaaccctgtcttga-- 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 ctggtctacaaagtgagtgccaggacagccagggctacacagagaaaccctgtcttgaaa 532
Query: 182 ---aaaacaaaacaacaacaacaaaaaaaaaccattgaaatctaaattatagttccatcc 238
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 531 aacaaaacaaaacaacaacaacaacaaaaaaccattgaaatctaaattatagttccatcc 472
Query: 239 accctgtaatacacacctgctttaggtgtccccttcccatttcagatggcttagatccca 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 accctgtaatacacacctgctttaggtgtccccttcccatttcagatggcttagatccca 412
Query: 299 atgatgaggacctggggagtt 319
|||||||||||||||||||||
Sbjct: 411 atgatgaggacctggggagtt 391
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no162_b08.g1 MSMg01no162_b08.g1 CHROMAT_FILE:
MSMg01no162_b08.g1 PHD_FILE: MSMg01no162_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:22 2005
(288 letters)
>mm_chr13_63270142_63270829
Length = 688
Score = 534 bits (276), Expect = e-156
Identities = 285/288 (98%)
Strand = Plus / Plus
Query: 1 cagtcctgacttcctttggtgatgaacagcagtatggaagtgtaagccaaataaatcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagtcctgacttcctttggtgatgaacagcagtatggaagtgtaagccaaataaatcctt 260
Query: 61 tcctccccatcttgcttcttggtcatgctgtttgtgcaggaatagaaaccctgactaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcctccccatcttgcttcttggtcatgctgtttgtgcaggaatagaaaccctgactaaga 320
Query: 121 caaatggcctttctatgttcaatctatgggaccagaaggtgattgctaaaagaagctgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 caaatggcctttctatgttcaatctatgggaccagaaggtgattgctaagagaagctgtc 380
Query: 181 catggatgggaagagagaaatactgaaataaagagcaaatgagtgtcaggtactatgcgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catggatgggaagagagaaatactgaaataaagagcaaatgagtgtcaggtactatgcgc 440
Query: 241 attcaaaggtagaaaaggcctgaaagccttgtggacaagctgcccact 288
||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 attcagaggtagaagaggcctgaaagccttgtggacaagctgcccact 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
