Query= MSMg01no166_h01.b1 MSMg01no166_h01.b1 CHROMAT_FILE:
MSMg01no166_h01.b1 PHD_FILE: MSMg01no166_h01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:56 2005
(325 letters)
>mm_chr13_9082456_9083180
Length = 725
Score = 594 bits (307), Expect = e-174
Identities = 316/319 (99%)
Strand = Plus / Plus
Query: 4 ggaattcaaacaagcccaatctttgcaggcaatcagagctgctggaagtatgagagtgct 63
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 204 ggaattcaaacaagcccaatctttgcaggcaatcagagctgctgggagtatgagagtgct 263
Query: 64 actgccatgtcaggcccagatggcagcgttccataggtcctcccctccccctgactgtca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 actgccatgtcaggcccagatggcagcgttccataggtcctcccctccccctgactgtca 323
Query: 124 catcctctctgcccctgtgccatggaccttggagcagataatgcatgtccacctatggcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 catcctctctgcccctgtgccatggaccttggagcagataatgcatgtccacctatggcc 383
Query: 184 aagtagtcaacagtcacttacaatcatattttttaaaacctgaaaaatgaacttgtcaaa 243
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 384 aagtagtcaacagtcacttacaatcatatttttaaaaacctgaaaaatgaacttgtcaaa 443
Query: 244 attttctcatatgtgaaataacaatttagtaactatctgactaaaactgaaatattggga 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gttttctcatatgtgaaataacaatttagtaactatctgactaaaactgaaatattggga 503
Query: 304 tgctttaaaatgaagaatc 322
|||||||||||||||||||
Sbjct: 504 tgctttaaaatgaagaatc 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 725
Length adjustment: 9
Effective length of query: 316
Effective length of database: 716
Effective search space: 226256
Effective search space used: 226256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no166_h01.g1 MSMg01no166_h01.g1 CHROMAT_FILE:
MSMg01no166_h01.g1 PHD_FILE: MSMg01no166_h01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:56 2005
(545 letters)
>mm_chr13_9213686_9214630
Length = 945
Score = 930 bits (481), Expect = 0.0
Identities = 504/512 (98%)
Strand = Plus / Minus
Query: 32 aagtactggggaaactgagtcatgaagatacaaatcaagtacagcctaggctacagagtt 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931 aagtactggggaaactgagtcatgaagatacaaatcaagtacagcctaggctacagagtt 872
Query: 92 cgagcctgtctcagaaatcacaaccatgggcctggagagatggtgcagctgttaagggtg 151
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 871 cgagcctgtctcagaaatcacaaccatgggcctggagaaatggtgcagctgttaagggtg 812
Query: 152 tgtcctgctccttcagaggacccaagttcagttcccagtacccattccaggtagcttaca 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 tgtcctgctccttcagaggacccaagttcagttcccagtacccattccaggtagcttaca 752
Query: 212 accatctctaacttccactccaggagatacatagagcctctgttctctgagagcatccac 271
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 accatctctaacttccgctccaggagatacatagagcctctgttctctgagagcatccac 692
Query: 272 aattacatgaacgtccttgcacagagacatatacataactagaaaataaacctttaaaaa 331
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 aattacatgaacatacttgcacagagacatatacataactagaaaataaacctttaaaaa 632
Query: 332 atgacagtatcagcaacaacatgtgacatacaagaggagttacaggaaaggagaaagaat 391
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 631 atgacagtatcagcaacaacatgtgacatacaagaggagttacaggaaagaagaaagaat 572
Query: 392 agggcatttgaaggcagagtggctacggttttcatgaaatcttatggaaggcatgatggt 451
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 571 agggcatttgaaggcagagtggctacggttttcatgaaatcttatggaagacatgatggt 512
Query: 452 ttgtatatccttggccctgggaatgacactatctggatgtgtggccttgttggagtaggt 511
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 511 ttgtatatccttggccctgggaatgacactatctggatgtgtggccttgttggagtgggt 452
Query: 512 gtggctttgttggagtaggnatgtccctgtgg 543
||||||||||||||||||| ||||||||||||
Sbjct: 451 gtggctttgttggagtaggtatgtccctgtgg 420
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
