Query= MSMg01no166_m13.b1 MSMg01no166_m13.b1 CHROMAT_FILE:
MSMg01no166_m13.b1 PHD_FILE: MSMg01no166_m13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:23 2005
(361 letters)
>mm_chr13_4809718_4810478
Length = 761
Score = 646 bits (334), Expect = 0.0
Identities = 352/358 (98%), Gaps = 1/358 (0%)
Strand = Plus / Plus
Query: 4 ggaattcctcctgtgccatacagtggattcaattgtctatctcaattagcatgttataat 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctcctgtgacatacagtggattcaattgtctatctcaattagcatgttataat 263
Query: 64 cctaagcttacattaatatgaataatcttcatggggttgtatatattaagatatggaaat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cctaagcttacattaatatgaataatcttcatggggttgtatatattaagatatggaaat 323
Query: 124 gtttactatctcataaacactattttaaacttataacaatttatttgtttatttacatcc 183
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtttactatctcataaacattattttaaacttataacaatttatttgtttatttacatcc 383
Query: 184 caaatgcagtcatcccctcctctacccccacactgatcacccttcacagagttcctcctc 243
|||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 384 caaatgcagtcatctcctcctctacccc-acactgatcacccttcacagagttcctcctc 442
Query: 244 ccaacccctacacatctcttctgagagggtgttatcccctttatatcccccaaccctgca 303
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 443 ccaacccctacacatctcttctgagagggtgggatcccctttatatcccccaaccctgca 502
Query: 304 catcaagtctgcaggattaagtttctctcatgctgtaaccaaacaaggcagccatgga 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 catcaagtctgcaggattaagtttctctcatgctgtaaccaaacaaggcagccatgga 560
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 761
Length adjustment: 9
Effective length of query: 352
Effective length of database: 752
Effective search space: 264704
Effective search space used: 264704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no166_m13.g1 MSMg01no166_m13.g1 CHROMAT_FILE:
MSMg01no166_m13.g1 PHD_FILE: MSMg01no166_m13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:23 2005
(504 letters)
>mm_chr13_4970516_4971419
Length = 904
Score = 959 bits (496), Expect = 0.0
Identities = 502/504 (99%)
Strand = Plus / Minus
Query: 1 aatttctgttccttttgtccaaaagttgtgctgtttgtctgcctgtagcttcatgctatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 aatttctgttccttttgtccaaaagttgtgctgtttgtctgcctgtagcttcatgctatg 645
Query: 61 acatcattctaatcagaaatggaagtgctccttgccaatattagaacattcttgaacttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 acatcattctaatcagaaatggaagtgctccttgccaatattagaacattcttgaacttg 585
Query: 121 gtgatttcatacatttgaaatggatttaaatctttagaagtcagttcatgaactataaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gtgatttcatacatttgaaatggatttaaatctttagaagtcagttcatgaactataaaa 525
Query: 181 taaaaagaacattacttcctttttccaagaaaagtgcttcccagccacttcttggacatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 taaaaagaacattacttcctttttccaagaaaagtgcttcccagccacttcttggacatg 465
Query: 241 acatttcctccatgaagccagacttccatgagctaaagggaaggaaattggaaacatatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 acatttcctccatgaagccagacttccatgagctaaagggaaggaaattggaaacatatg 405
Query: 301 gagcagcaaattgtctctggatttaactcttacaatgaccacattcacatgttggaacaa 360
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 404 gagcagcaaattgtctctggatttaactcttacaatgaaaacattcacatgttggaacaa 345
Query: 361 taagtacaccagtctggggattgagatagacattaaactgaattaaaaatgaatagctta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 taagtacaccagtctggggattgagatagacattaaactgaattaaaaatgaatagctta 285
Query: 421 acacctttatgggactggagcctatgaagtatgtttagcaatccgtatgcttggcgcttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 acacctttatgggactggagcctatgaagtatgtttagcaatccgtatgcttggcgcttt 225
Query: 481 tgttactgatttgtttgaaataac 504
||||||||||||||||||||||||
Sbjct: 224 tgttactgatttgtttgaaataac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
