Query= MSMg01no167_a05.b1 MSMg01no167_a05.b1 CHROMAT_FILE:
MSMg01no167_a05.b1 PHD_FILE: MSMg01no167_a05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:40 2005
(650 letters)
>mm_chr13_42431485_42432534
Length = 1050
Score = 1220 bits (631), Expect = 0.0
Identities = 643/647 (99%)
Strand = Plus / Plus
Query: 4 ggaattccttcttctcccattcattcatccacctctgccgatttcctctgtaactctaga 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccttcttctcccattcattcatccacctctgccgatttcctctgtaactctaga 263
Query: 64 agttgagtcccaagggcgttttagagtagttctcacatcttaggtgaacaagctgacaac 123
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 264 agttgagtcccaagggcgttttagagtagctctcacatcttaggtgaacaagctgacaac 323
Query: 124 tgcctttgctcttactttacttcgaatgtaaaagaagtgctctgtgctgatgtagctgat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgcctttgctcttactttacttcgaatgtaaaagaagtgctctgtgctgatgtagctgat 383
Query: 184 aagagcttggcaggctggtatgaatgacacagaaagccaaggcatccgagtccagtgttt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aagagcttggcaggctggtatgaatgacacagaaagccaaggcatccgagtccagtgttt 443
Query: 244 tcacgtccttcatccttatctctcctaatagaaacgcctatttatttgtcttccactcag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcacgtccttcatccttatctctcctaatagaaacgcctatttatttgtcttccactcag 503
Query: 304 cagtgagctccttgaggccctgtatcccagcatccagcactgttcttggcaaacatgagg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cagtgagctccttgaggccctgtatcccagcatccagcactgttcttggcaaacatgagg 563
Query: 364 agctcaacaactatttgtagagtaaattgaatgagattatctaggttcccatgagatcat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agctcaacaactatttgtagagtaaattgaatgagattatctaggttcccatgagatcat 623
Query: 424 cccatgaaattctatgcctaggcaactcctcaggaacattctagaagggcaagagagaac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cccatgaaattctatgcctaggcaactcctcaggaacattctagaagggcaagagagaac 683
Query: 484 accccctcccgccaccaggatagagactgcatctcattcaactctataccctggagtacc 543
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 accccctcctgccaccaggatagagactgcatctcattcaactctataccctggagtacc 743
Query: 544 atgtttgcttaaggaatgaatgaaggtctgtcatcattcaaaggctgggaatgggaaagt 603
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 744 atgtttgcttaaggaatgaatgaaggtctgtcatcattcaaaggctgggaatgggagagt 803
Query: 604 ctcgtaccatttttagcttggcagatactcagaagaccaatacaggt 650
||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ctcgtcccatttttagcttggcagatactcagaagaccaatacaggt 850
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space: 665600
Effective search space used: 665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no167_a05.g1 MSMg01no167_a05.g1 CHROMAT_FILE:
MSMg01no167_a05.g1 PHD_FILE: MSMg01no167_a05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:40 2005
(641 letters)
>mm_chr13_42595568_42596610
Length = 1043
Score = 1149 bits (594), Expect = 0.0
Identities = 631/644 (97%), Gaps = 4/644 (0%)
Strand = Plus / Minus
Query: 1 cacaggtccctaggaagtagcagcccaattgataaacttccccaggacagaaactgagcc 60
|||||||| ||||||||| |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 843 cacaggtcgctaggaagtggcagcccaattgataaacttccccagcacagaaactaagcc 784
Query: 61 ataacattcccattaactttgttttgagcaatgattaatgatacaggctagcgacaaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 ataacattcccattaactttgttttgagcaatgattaatgatacaggctagcgacaaatc 724
Query: 121 caagctaatacagatagggagctgttatttccctcatcctccaaaatttggctatcattg 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 caagctaatatagatagggagctgttatttccctcatcctccaaaatttggctatcattg 664
Query: 181 aataaacattcctttccttggaagccttccttcttcccccacactggtatgccagcaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 aataaacattcctttccttggaagccttccttcttcccccacactggtatgccagcaatg 604
Query: 241 ttgccaacagtctataggaggatatagaaggtatcctggcctgacctagtgccccagcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ttgccaacagtctataggaggatatagaaggtatcctggcctgacctagtgccccagcct 544
Query: 301 tcaaagcaaatttctctacatgttactgtcagttctatttc-cctaacgtacccattcac 359
||||||||||||||||||||||||||||| ||||||||||| || ||| |||||||||||
Sbjct: 543 tcaaagcaaatttctctacatgttactgttagttctatttctcc-aacatacccattcac 485
Query: 360 gttcacaactcttttgctcacaaggtattt--aaaaaaaaaactttctaaaactaaaata 417
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 484 gttcacaactcttttgctcacaaggtatttaaaaaaaaaaaactttctaaaactaaaata 425
Query: 418 caaatttagagccaaactttccacacatgtacacatgtaagggaacatgagaatttggct 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 caaatttagagccaaactttccacacatgtacacatgtaagggaacatgagaatttggct 365
Query: 478 ccaactaaaagaccatcttcccaatccgtggaaagaacccattatggcacgaagtttggt 537
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 364 ccaactaaaagaccatcttcccaatccatggaaagaacccattatggcacgaagtttggt 305
Query: 538 aaaccgtgccatgaactttgaaacatttttgttaaatgcagaggacagacttgaactaac 597
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aaaccgtgccacgaactttgaaacatttttgttaaatgcagaggacagacttgaactaac 245
Query: 598 caaagctgggtctcagtcacatggctccaaaatatgacaacgtt 641
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 caaagctgggtctcagtcacatggctccaaaatatgacaacgtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1043
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1033
Effective search space: 651823
Effective search space used: 651823
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
