Query= MSMg01no168_n09.b1 MSMg01no168_n09.b1 CHROMAT_FILE:
MSMg01no168_n09.b1 PHD_FILE: MSMg01no168_n09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:21 2005
(203 letters)
>mm_chr13_34184114_34184716
Length = 603
Score = 373 bits (193), Expect = e-108
Identities = 199/201 (99%), Gaps = 1/201 (0%)
Strand = Plus / Plus
Query: 4 ggaattcaggaaaacctaaatctttgttcctgggccatg-tcactcagaatggctccaga 62
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 203 ggaattcaggaaaacctaaatctttgttcctgggccatggtcactcagaatggctccaga 262
Query: 63 ataagctcttcaagatgagagctgtgttttggtttggtttttggtttttatgccaaaact 122
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 263 ataagctcttcaagatgagagctgtgttttggtttggtttttgttttttatgccaaaact 322
Query: 123 agaaaaacaaatactaaatctcagtgagatcatacaatccagacttgaggttttcgagga 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 agaaaaacaaatactaaatctcagtgagatcatacaatccagacttgaggttttcgagga 382
Query: 183 gtgaaagtctcttaagggagg 203
|||||||||||||||||||||
Sbjct: 383 gtgaaagtctcttaagggagg 403
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 203
Length of database: 603
Length adjustment: 8
Effective length of query: 195
Effective length of database: 595
Effective search space: 116025
Effective search space used: 116025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no168_n09.g1 MSMg01no168_n09.g1 CHROMAT_FILE:
MSMg01no168_n09.g1 PHD_FILE: MSMg01no168_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:21 2005
(239 letters)
>mm_chr13_34383717_34384354
Length = 638
Score = 426 bits (220), Expect = e-124
Identities = 235/240 (97%), Gaps = 3/240 (1%)
Strand = Plus / Minus
Query: 1 catcctgcggaggtggaggtcacatggagtggctacaaaggccagctgaga-agaggtga 59
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 438 catcctgcggaggtggaggtcacatggagtggctacaaaggccagctgagaca-aggtga 380
Query: 60 agtgactggctgggattaatggttaacagtttgtcttttctgtggtctaagcccttgctt 119
||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 379 agtgactgggtgggattaatggttaacagtttgtc-tttctgtggtctaagcccttgctt 321
Query: 120 tcctgtcaacagcctggcctcacctgccccatctgcattttccttcctcactggacattt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tcctgtcaacagcctggcctcacctgccccatctgcattttccttcctcactggacattt 261
Query: 180 actggtttaggaaaatcttggtatcctgttataccctccaggattccctgttctcacctg 239
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 260 actggtttaggaaaatcttgggatcctgttataccctccaggattccctgttctcacctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 638
Length adjustment: 9
Effective length of query: 230
Effective length of database: 629
Effective search space: 144670
Effective search space used: 144670
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
