Query= MSMg01no170_m10.b1 MSMg01no170_m10.b1 CHROMAT_FILE:
MSMg01no170_m10.b1 PHD_FILE: MSMg01no170_m10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:49 2005
(315 letters)
>mm_chr13_24466024_24466738
Length = 715
Score = 547 bits (283), Expect = e-160
Identities = 304/311 (97%)
Strand = Plus / Plus
Query: 5 gaattccaaagagaacgggccaggtggatggcctgcagtggcagaccattggcagaggaa 64
|||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 205 gaattccaaagagaacgggctaggtggatgacctgcagtggcagaccattggcagaggaa 264
Query: 65 gtggatctctgcccttgtctcaaaaggcactgatgagaagcagtgttaggactggaaaca 124
||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 265 gtggatctctgcccttgtctcaaaaggcactgatgagaagcggtgacaggactggaaaca 324
Query: 125 gagcccaccctttccctcaatgacccacatcttccagctgggtcccacagcccacaggct 184
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gagctcaccctttccctcaatgacccacatcttccagctgggtcccacagcccacaggct 384
Query: 185 ccacacccccagcaaggccactactacctctgccctgctccattgtctttacaaactccc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccacacccccagcaaggccactactacctctgccctgctccattgtctttacaaactccc 444
Query: 245 actcagactcatgggaaggtacaaaatgagaagagtggctttcatggtctaagaagcctg 304
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 445 actcagactcatgggaaggtacaaagtgagaagagtggctttcatggtctaagaagcctg 504
Query: 305 tgggcagggtc 315
|||||||||||
Sbjct: 505 tgggcagggtc 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no170_m10.g1 MSMg01no170_m10.g1 CHROMAT_FILE:
MSMg01no170_m10.g1 PHD_FILE: MSMg01no170_m10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:49 2005
(235 letters)
>mm_chr13_24607058_24607692
Length = 635
Score = 248 bits (128), Expect = 3e-70
Identities = 137/140 (97%), Gaps = 2/140 (1%)
Strand = Plus / Minus
Query: 92 tctagaggctgagacccagagaatagcagctgaaggctagagggggcagtg-gccaacaa 150
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 430 tctagaggctgagacccagagaatagcagctgaaggctagagggggcag-gagccaacaa 372
Query: 151 aggttcgaatctccaggagaccatagttaaggagggcagtttcattagacacttcctctt 210
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aggtttgaatctccaggagaccatagttaaggagggcagtttcattagacacttcctctt 312
Query: 211 tttctttcagcttgtgtgtg 230
||||||||||||||||||||
Sbjct: 311 tttctttcagcttgtgtgtg 292
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 635
Length adjustment: 9
Effective length of query: 226
Effective length of database: 626
Effective search space: 141476
Effective search space used: 141476
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
