Query= MSMg01no172_g10.b1 MSMg01no172_g10.b1 CHROMAT_FILE:
MSMg01no172_g10.b1 PHD_FILE: MSMg01no172_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:42:52 2005
(309 letters)
>mm_chr13_97441460_97442168
Length = 709
Score = 540 bits (279), Expect = e-158
Identities = 294/305 (96%), Gaps = 11/305 (3%)
Strand = Plus / Minus
Query: 5 gaattcagattcagtttccacttacatggcagctaacaaccatcttacgtaactccagtt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gaattcagattcagtttccacttacatggcagctaacaaccatcttacgtaactccagtt 617
Query: 65 ccagaggatcccccaccctcttcttgctattccttgggcactgttctgtacatgtagtgc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ccagaggatcccccaccctcttcttgctattccttgggcactgttctgtacatgtagtgc 557
Query: 125 acagcagcagcagcagcacacacacacacacacacacacacacacacatacacacacaga 184
| ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 556 a---------cagcagcacacacacacacacacacacacacacacac--acacacacaga 508
Query: 185 aacagagagcgcacaaaaacaaaaggagttatgtaccaattgctctctttacgacatttc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 aacagagagcgcacaaaaacaaaaggagttatgtaccaattgctctctttacgacatttc 448
Query: 245 cacataaaacagtaagacaagtcatagactattacggaagtgctatgggcgttcagaaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 cacataaaacagtaagacaagtcatagactattacggaagtgctatgggcgttcagaaga 388
Query: 305 gagat 309
|||||
Sbjct: 387 gagat 383
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 11
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 709
Length adjustment: 9
Effective length of query: 300
Effective length of database: 700
Effective search space: 210000
Effective search space used: 210000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no172_g10.g1 MSMg01no172_g10.g1 CHROMAT_FILE:
MSMg01no172_g10.g1 PHD_FILE: MSMg01no172_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:42:52 2005
(283 letters)
>mm_chr13_97299968_97300650
Length = 683
Score = 516 bits (267), Expect = e-151
Identities = 279/283 (98%)
Strand = Plus / Plus
Query: 1 ttggttcctgtggtttgggacagtggttaaagagaacattttctctcgaaatcttcaaat 60
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 201 ttggttcctgtggtttgggacagtggttgaagagaacattttctctggaaatcttcaaat 260
Query: 61 tcttcccaggctgattctattgctgactcgtcagattaccacttaaaaacacaaagcaaa 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcttcccaggccgattctattgctgactcgtcagattaccacttaaaaacacaaagcaaa 320
Query: 121 ccctgtgtgtttggtggtaatgaaggatggaaacttgcaatgtttcaaaaggaattctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccctgtgtgtttggtggtaatgaaggatggaaacttgcaatgtttcaaaaggaattctaa 380
Query: 181 gggagaggtttcaggatgggggcttcttctaaaatgtactcaaaagcatgccaacaacat 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 gggagaggtttcaggatgggggcttcttctaaaatgtacacaaaagcatgccaacaacat 440
Query: 241 catgagtacgtggcatattgaccaaagtagtctgaatgaattt 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catgagtacgtggcatattgaccaaagtagtctgaatgaattt 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
