Query= MSMg01no174_d22.b1 MSMg01no174_d22.b1 CHROMAT_FILE:
MSMg01no174_d22.b1 PHD_FILE: MSMg01no174_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:04 2005
(681 letters)
>mm_chr13_95011596_95012676
Length = 1081
Score = 1257 bits (650), Expect = 0.0
Identities = 671/678 (98%)
Strand = Plus / Plus
Query: 4 ggaattccctcaccactcacaggactatctgcaaagccttcacagcatccccaggaaaag 63
|||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccctcaccacacacacgactatctgcaaagccttcacagcatccccaggaaaag 263
Query: 64 ctaacagcctctccatcacaacccagtgccagccaaggaggcctaactcctgctgtttct 123
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctaacagcctctccatcaaaacccagtgccagccaaggaggcctaactcctgctgtttct 323
Query: 124 gcttagcttagtactagaggtataagaaaaccactggacatgagagggagtggattgcaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcttagcttagtactagaggtataagaaaaccactggacatgagagggagtggattgcaa 383
Query: 184 caagtacctgaatgatctgtatacaggataagcttttcatagcttcagaggattcagcag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 caagtacctgaatgatctgtatacaggataagcttttcatagcttcagaggattcagcag 443
Query: 244 taaatggttgactcttgctttgggcctgtggcaaggcagtgtatcatgctggaccttggg 303
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 taaatgattgactcttgctttgggcctgtggcaaggcagtgtatcatgctggaccttggg 503
Query: 304 gtggagcaaagccactcacctcacctctgccaccaccgcagcaaataacttaaatagttc 363
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 504 gtggagcaaagccactcacctcacctctgccaccaccacagcaaataacttaaatagctc 563
Query: 364 ccctgaagccgtaccttcaggtgaaatacaccagacacaggaagaaaaccattgcatgat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ccctgaagccgtaccttcaggtgaaatacaccagacacaggaagaaaaccattgcatgat 623
Query: 424 ctcatttacatgtgaaagctaaaaagaaggctcacagagaggacaaaacggtgattacag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ctcatttacatgtgaaagctaaaaagaaggctcacagagaggacaaaacggtgattacag 683
Query: 484 aagatgaggagaaactggggcaggaaaggggcagatgaaggccagaggatacaagttcct 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aagatgaggagaaactggggcaggaaaggggcagatgaaggccagaggatacaagttcct 743
Query: 544 aaggcaggcaagtctcctgctgtgacacgcagcaggaagaccacaggtgatgtagtcaaa 603
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 744 aaggcaggcaagtctcctgctgtgacacgcagcaggaagacaacaggtgatgtagtcaaa 803
Query: 604 ctgcacaggaaatacacgctgagctctcagtgtggagctgctaccaaaacatagcatttg 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ctgcacaggaaatacacgctgagctctcagtgtggagctgctaccaaaacatagcatttg 863
Query: 664 tatgaactgacagtaaga 681
||||||||||||||||||
Sbjct: 864 tatgaactgacagtaaga 881
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1081
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1071
Effective search space: 718641
Effective search space used: 718641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no174_d22.g1 MSMg01no174_d22.g1 CHROMAT_FILE:
MSMg01no174_d22.g1 PHD_FILE: MSMg01no174_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:04 2005
(349 letters)
>mm_chr13_95097878_95098626
Length = 749
Score = 659 bits (341), Expect = 0.0
Identities = 346/349 (99%), Gaps = 3/349 (0%)
Strand = Plus / Minus
Query: 1 gcttgtcaatgagaattacccagatgaactccagggcacagacattgaaagaagaatcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gcttgtcaatgagaattacccagatgaactccagggcacagacattgaaagaagaatcac 685
Query: 61 aaacctactcaaagaatccaaggagttgaaagacagaacaaagaaacagctcaattaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aaacctactcaaagaatccaaggagttgaaagacagaacaaagaaacagctcaattaaaa 625
Query: 121 gcacgaggaggaaggagcttaaggagaaaaatgcctgagggaagccctagaaaacacaga 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gcac---gaggaaggagcttaaggagaaaaatgcctgagggaagccctagaaaacacaga 568
Query: 181 cataaataaggctgatggtgtgagacctaggcaactactccattttgaatgcaggcccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 cataaataaggctgatggtgtgagacctaggcaactactccattttgaatgcaggcccct 508
Query: 241 gcacatatcaaccctgcagccagctccctagtccaaggaaaaagaccacagagaagacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gcacatatcaaccctgcagccagctccctagtccaaggaaaaagaccacagagaagacct 448
Query: 301 gagcaggacgagatcagggcctggtcccacagcaacagccaatcaggag 349
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gagcaggacgagatcagggcctggtcccacagcaacagccaatcaggag 399
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 749
Length adjustment: 9
Effective length of query: 340
Effective length of database: 740
Effective search space: 251600
Effective search space used: 251600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
