CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGACCGCG
GAATTCAGGTCTATGCCCTTAATCTACAACACTTGCACCTACTGGACCAT
CTCTCAGGCCCTTAGCTACTTTCAATCCGTTTGTTCTTTGCCTTATATAC
AAAATAGAATTTATAAGAAAAAAATAAGCATTTAAATGTTATCAGTATAC
CACCAAACTGAACCAAATCATATTTCATTCAAAAGGAAGTGTTTGTTGCT
TAAGTTTTTCAAAAACATATTAAGTAAGGCTGGCCAAAGGTTCATTCATG
TTTATCGTTTTATGTTTTTGTATAACCCACCCAGATCTAAACATTCTTTT
GCATGTATCAGATATTATCTAATAACATAGAATGATATATAATATTGTAT
TTATTTACTAAGTCTCTGGATTATCAGTTAATTTTTCTCTGATGACTTCC
TAACCATGAACATTATTTCCTAAACAGTATTGAATTTTTAGGGGAATAAA
TCAACATTTCAGAACCATAGAATCTTTCCTAGTACCACTAAGTTATTTGT
GTTGGAGGACCTCCCCTATCTCTGTCCCTACAGCGTCCCTGTTGAATGCC
TTGCTCATTGCATAAGATCCTACTGGTTTCTCAGATGGGACACTTTTGGG
ACCAATGCACCTTCTACTTATTTGTCCTACCTGCCTCTCATTTCATAATC
TTTTACTTTGCAGATCAAAATTT

TACGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXACAGAAGAGAAGACTGTCCTTA
GGGGAGAAGACATCAAAATATGGGCTGTACAGAAAGACTTCAGTGACAAT
TTGGTATTGATTTTATAATTGCATTTTAAGTGTTGATAGAACATTTGTTC
TGGAGTATTATTAAATGAGCATATGTATCCAATCTGGACAGGAGAGTTGG
AATCTACTTTAAGAAAAAAGCCAAGTACAGACTCTAAAGGAGTTTTTTCG
TTTTTTTCTTTTTGCTTTTTCTAGGAAGAGAGTATTTATTGTAAAGAGGC
AGAGGCATTGGCAGATTTATGTTCCTCTTGACATAGAACCTTTATGAAGA
GAAGATACTACAGTATTGGCTCACGGTTCAACTGTGTAGAACTCTAGGCA
GCAATGAGGGCTTTAGGTAAAGGTAAAATAGGAAGCTGTCATAGGCTATT
GATTAGTTTCTCTCTAAACCAATTGCATTTAAGAGGCTGGTTGTGGTATC
CATACTGACAGTAGAGTTGAAGCTTGGCGCACTATCAAGATGAAACAAGG
ATGACTTTGATTGAGGTAGAGGTGAATAAGGTGTACATAGCTGTGGTCTA
CATCAGTGGCACTTAACCTTCCGATCACATTCTCTTGCGTGCACAAAATT
AAATGCTCAGTCTTN

Query= MSMg01no174_f04.b1 MSMg01no174_f04.b1 CHROMAT_FILE:
MSMg01no174_f04.b1 PHD_FILE: MSMg01no174_f04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:09 2005
         (646 letters)



>mm_chr13_76380866_76381911
          Length = 1046

 Score = 1241 bits (642), Expect = 0.0
 Identities = 645/646 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aacacttgcacctactggaccatctctcaggcccttagctactttcaatccgtttgttct 60
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 aacacttgcacctactggaccatctctcaggcccttagctactttgaatccgtttgttct 260

                                                                       
Query: 61  ttgccttatatacaaaatagaatttataagaaaaaaataagcatttaaatgttatcagta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgccttatatacaaaatagaatttataagaaaaaaataagcatttaaatgttatcagta 320

                                                                       
Query: 121 taccaccaaactgaaccaaatcatatttcattcaaaaggaagtgtttgttgcttaagttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taccaccaaactgaaccaaatcatatttcattcaaaaggaagtgtttgttgcttaagttt 380

                                                                       
Query: 181 ttcaaaaacatattaagtaaggctggccaaaggttcattcatgtttatcgttttatgttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcaaaaacatattaagtaaggctggccaaaggttcattcatgtttatcgttttatgttt 440

                                                                       
Query: 241 ttgtataacccacccagatctaaacattcttttgcatgtatcagatattatctaataaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgtataacccacccagatctaaacattcttttgcatgtatcagatattatctaataaca 500

                                                                       
Query: 301 tagaatgatatataatattgtatttatttactaagtctctggattatcagttaatttttc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagaatgatatataatattgtatttatttactaagtctctggattatcagttaatttttc 560

                                                                       
Query: 361 tctgatgacttcctaaccatgaacattatttcctaaacagtattgaatttttaggggaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctgatgacttcctaaccatgaacattatttcctaaacagtattgaatttttaggggaat 620

                                                                       
Query: 421 aaatcaacatttcagaaccatagaatctttcctagtaccactaagttatttgtgttggag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaatcaacatttcagaaccatagaatctttcctagtaccactaagttatttgtgttggag 680

                                                                       
Query: 481 gacctcccctatctctgtccctacagcgtccctgttgaatgccttgctcattgcataaga 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gacctcccctatctctgtccctacagcgtccctgttgaatgccttgctcattgcataaga 740

                                                                       
Query: 541 tcctactggtttctcagatgggacacttttgggaccaatgcaccttctacttatttgtcc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcctactggtttctcagatgggacacttttgggaccaatgcaccttctacttatttgtcc 800

                                                         
Query: 601 tacctgcctctcatttcataatcttttactttgcagatcaaaattt 646
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tacctgcctctcatttcataatcttttactttgcagatcaaaattt 846


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space:   658896
Effective search space used:   658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no174_f04.g1 MSMg01no174_f04.g1 CHROMAT_FILE:
MSMg01no174_f04.g1 PHD_FILE: MSMg01no174_f04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:10 2005
         (288 letters)



>mm_chr13_76518488_76519175
          Length = 688

 Score =  555 bits (287), Expect = e-162
 Identities = 287/287 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   acagaagagaagactgtccttaggggagaagacatcaaaatatgggctgtacagaaagac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 acagaagagaagactgtccttaggggagaagacatcaaaatatgggctgtacagaaagac 428

                                                                       
Query: 61  ttcagtgacaatttggtattgattttataattgcattttaagtgttgatagaacatttgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ttcagtgacaatttggtattgattttataattgcattttaagtgttgatagaacatttgt 368

                                                                       
Query: 121 tctggagtattattaaatgagcatatgtatccaatctggacaggagagttggaatctact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tctggagtattattaaatgagcatatgtatccaatctggacaggagagttggaatctact 308

                                                                       
Query: 181 ttaagaaaaaagccaagtacagactctaaaggagttttttcgtttttttctttttgcttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ttaagaaaaaagccaagtacagactctaaaggagttttttcgtttttttctttttgcttt 248

                                                          
Query: 241 ttctaggaagagagtatttattgtaaagaggcagaggcattggcaga 287
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ttctaggaagagagtatttattgtaaagaggcagaggcattggcaga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space:   189441
Effective search space used:   189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)