Query= MSMg01no174_k15.b1 MSMg01no174_k15.b1 CHROMAT_FILE:
MSMg01no174_k15.b1 PHD_FILE: MSMg01no174_k15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:35 2005
(311 letters)
>mm_chr13_36310028_36310737
Length = 710
Score = 576 bits (298), Expect = e-169
Identities = 304/306 (99%), Gaps = 1/306 (0%)
Strand = Plus / Minus
Query: 5 gaattcactgaaaccgtgtattacaaaagagacttccttctttccctgctgctatcttat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gaattcactgaaaccgtgtattacaaaagagacttccttctttccctgctgctatcttat 450
Query: 65 ttcctcaccctgtaataagactttgtgccagtggggtaaggggaagagatctgaaatagg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ttcctcaccctgtaataagactttgtgccagtggggtaaggggaagagatctgaaatagg 390
Query: 125 ctgaatattaagacactgtagctgagaaacaatgactgccacacagctgaagcaaaccag 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 389 ctgaatattaagacactgtagctgagaaacaatgactgccacacagctgaagcaaa-cag 331
Query: 185 tgcttgtcggggcactgttccagatgaggtacccgccttccactggacacactcttctag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tgcttgtcggggcactgttccagatgaggtacccgccttccactggacacactcttctag 271
Query: 245 gttcagcctcagcttcttcagagagtatttatccttcattgaaaatgacactcatttcca 304
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 270 gttcagcctcagcttcttcagagagtaattatccttcattgaaaatgacactcatttcca 211
Query: 305 aaccca 310
||||||
Sbjct: 210 aaccca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 710
Length adjustment: 9
Effective length of query: 302
Effective length of database: 701
Effective search space: 211702
Effective search space used: 211702
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no174_k15.g1 MSMg01no174_k15.g1 CHROMAT_FILE:
MSMg01no174_k15.g1 PHD_FILE: MSMg01no174_k15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:35 2005
(288 letters)
>mm_chr13_36161670_36162357
Length = 688
Score = 530 bits (274), Expect = e-155
Identities = 283/286 (98%)
Strand = Plus / Plus
Query: 1 actggtaacatgttctgtcactactgaagaagaaaacaaatgctgaccatctagttccca 60
|||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 actggtaacatgctctgtcactactgaagaagaaaacaaatgctgacaatctagttccca 260
Query: 61 ctgtgttcctgtgtcttagttaccacagcctactctaatcttaagtgaaaaaaactgtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgtgttcctgtgtcttagttaccacagcctactctaatcttaagtgaaaaaaactgtac 320
Query: 121 cagtaatttaaattgccagtctaagacactataatcagttttataaattataaataaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagtaatttaaattgccagtctaagacactataatcagttttataaattataaataaatt 380
Query: 181 gaattagagtaagtggtttgatgcaactatggtaggggaaatgccagcccaatgtacaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaattagagtaagtggtttgatgcaactatggtaggggaaatgccagcccaatgtacaat 440
Query: 241 ataaaagctgccattaccctacaccagccaacacagagcacaaata 286
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtaaaagctgccattaccctacaccagccaacacagagcacaaata 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
