CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAAGGCCCATACCTAACCATGATAAAAGCAATCTACAACAAACCAGT
AGCCAACATCAAAGTAAATGATGAGAAGCTTGAAGCAATCCCACTAAAAT
CAGGGACTAGACAAGGCTGTCCACTCTCCCCATACCTATTCAACATTGTA
CTTGAAGTCCTAGCCAGAGCAATTAGACAACAAAAGGAGATCAAGGGGAT
ACAAATTGGAAAAGATGAAATCAAAATATCACTTTTTGCATATGATATGA
TAGTATATATAAGTGACACTAAAAATTCAACCAGAGAACTCCTAAACCTG
ATAAACAGCTTATTTGTATTACCCACCCCCGACATTAACTCAAACAAGTC
AATTGCCTTTCTCTACACCCAGAATAAACAGGATGAGAAAGAAATTAGGG
AAACAACACCCTTCTCAATAGTCACAAATAATATAAAATATCTTGGCGTG
ACTCTAACTAAGGAAGTGAAAGACCTGTATAATAAAAACTTCAAGTCTCT
AAAGAAAGAAATTAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATGCT
CATGGATTGGCAGCATCAACATTGTAAAAATGGCTATCTTGCCAAAAGCA
ATCTACAGATTCAATGCAATCCCTATCAAAATTCCAACTCAATTCTTCAA
AGAATTAGAAAGAGCAATCTGCAAATTGAT

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXAAACAGAAACCATAGAGGTTTGTTTACAT
ATGCTTATAGGTTCATTCACCAGGGCATGCTTAGGTAGATTTTTAGAGTG
CAATCCAAACACAACTGCTTACAGATACTACCATTTGTGGTTGACTGGGA
CTTTCTAGATGAATTAACAATCATGATGCAGTCCCACATATAGTTGTTCA
TGCCAATCTGATCTCAGAATTTTTTTCTATTATTTTTAACTTTCTAGTAC
TCTAAATTATGTTGAGTTGGAATGTTAAATGAAATAGCATGCATTATAGA
ATAAACTTCTTTTGTCTATTTGCTTAAAAGACTTGAATATAAAACATGGC
AAACAAAACTCTAACATACATTATTTTTTAAAAAAACTTTCTGGAAATAT
AATTCCAGTTTGATACTTTGAAAAGGCATGGGATCTTCAACACATTCCTT
GTTTTAGTTGAAAGAATTTGAAAAATAAAAATTTTACTTTGCATATACCA
AAATATCTTTTACTCATTTGGTCTCTTTATGAACATATTTTCTTATAAAA
TATTTTATTTTTAAATCTACAATAAAACAAATTATATCATTAAAATAATT
GGCATCTGTGTTACTTGTATTTGAAATATAACAGCCAAGAAAAATCTACC
AGTTAAGTCCTGGCATTGCTGACA

Query= MSMg01no174_p13.g1 MSMg01no174_p13.g1 CHROMAT_FILE:
MSMg01no174_p13.g1 PHD_FILE: MSMg01no174_p13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:57 2005
         (601 letters)



>mm_chr13_87234079_87235079
          Length = 1001

 Score = 1056 bits (546), Expect = 0.0
 Identities = 588/602 (97%), Gaps = 2/602 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ggcatgcttaggtagatttttagagtgcaatccaaacacaactgcttacagatactacca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ggcatgcttaggtagatttttagagtgcaatccaaacacaactgcttacagatactacca 602

                                                                       
Query: 61  tttgtggttgactgggactttctagatgaattaacaatcatgatgcagtcccacatatag 120
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tttgtggttgactgggattttctagatgaattaacaatcatgatgcagtcccacatatag 542

                                                                       
Query: 121 ttgttcatgccaatctgatctcagaatttttttctattatttttaactttctagtactct 180
           ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 541 ttgttcatgccaatctgatctcagaatttttttctatta-ttttacctttctagtactct 483

                                                                       
Query: 181 aaattatgttgagttggaatgttaaatgaaatagcatgcattatagaataaacttctttt 240
           |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 482 aaattatgttgagttggaatgttaaacgaaatagcatgcattatagcataaacttctttt 423

                                                                       
Query: 241 gtctatttgcttaaaagacttgaatataaaacatggcaaacaaaactctaacatacatta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gtctatttgcttaaaagacttgaatataaaacatggcaaacaaaactctaacatacatta 363

                                                                       
Query: 301 -ttttttaaaaaaactttctggaaatataattccagtttgatactttgaaaaggcatggg 359
            |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttttttttaaaaaactttctggaaatataattccagtttgatactttgaaaaggcatggg 303

                                                                       
Query: 360 atcttcaacacattccttgttttagttgaaagaatttgaaaaataaaaattttactttgc 419
           | |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aacttcaacatattctttgttttagttgaaagaatttgaaaaataaaaattttactttgc 243

                                                                       
Query: 420 atataccaaaatatcttttactcatttggtctctttatgaacatattttcttataaaata 479
           |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 242 atataccaaattatcttttactcatttggtccctttatgaacatattttcttataaaata 183

                                                                       
Query: 480 ttttatttttaaatctacaataaaacaaattatatcattaaaataattggcatctgtgtt 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 182 ttttatttttaaatctacaataaaacaaattatatcattaaaataattggcatttgtgtt 123

                                                                       
Query: 540 acttgtatttgaaatataacagccaagaaaaatctaccagttaagtcctggcattgctga 599
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 122 acttgtatttgaaatataacagccaagaaaaatctaccagttaagccctggcattgctga 63

             
Query: 600 ca 601
           ||
Sbjct: 62  ca 61


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1001
Length adjustment: 10
Effective length of query: 591
Effective length of database: 991
Effective search space:   585681
Effective search space used:   585681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)