Query= MSMg01no175_e02.b1 MSMg01no175_e02.b1 CHROMAT_FILE:
MSMg01no175_e02.b1 PHD_FILE: MSMg01no175_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:18 2005
(331 letters)
>mm_chr13_115917761_115918489
Length = 729
Score = 596 bits (308), Expect = e-175
Identities = 323/328 (98%), Gaps = 2/328 (0%)
Strand = Plus / Minus
Query: 4 atgccaagtataagctctctggatcttctggaacggtgcccacccctgtaatgcccagag 63
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 529 atgccaagtataagctctctggatcttctggaacggtgcccacccctg-aatgcacagag 471
Query: 64 actcatctggttgcttgtttagctgctttggtttgtacagcacaagttatgaactggaaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 actcatctggttgcttgtttagctgctttggtttgtacagcacaagttatgaactggaaa 411
Query: 124 aactgttggctcataccttttcttgcttgagttaattagatcagatttgttgctgaaagg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 aactgttggctcataccttttcttgcttgagttaattagatcagatttgttgctgaaagg 351
Query: 184 ttttttttttttctccaattaggaagaactatttactaatgactctgcaatggagaatgg 243
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 350 -tttttttttttctccaattaggaagaactatttactaatgactctgcaatagagaatgg 292
Query: 244 ctccaaacaggtcttgatgttatgaaggcttcacattcagatttagtcaaaagatataga 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 291 ctccaaacaggtcttgatgttatgaaggcttcacattcagatttagtcaaaagatagaga 232
Query: 304 accccagcttgaaagaggagttagcatc 331
||||||||||||||||||||||||||||
Sbjct: 231 accccagcttgaaagaggagttagcatc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 729
Length adjustment: 9
Effective length of query: 322
Effective length of database: 720
Effective search space: 231840
Effective search space used: 231840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no175_e02.g1 MSMg01no175_e02.g1 CHROMAT_FILE:
MSMg01no175_e02.g1 PHD_FILE: MSMg01no175_e02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:18 2005
(194 letters)
>mm_chr13_115773962_115774555
Length = 594
Score = 366 bits (189), Expect = e-106
Identities = 192/193 (99%)
Strand = Plus / Plus
Query: 1 actgtgctccatgtttggttcgtgtaagatgataggtgtatttggaaggctgtggggata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgtgctccatgtttggttcgtgtaagatgataggtgtatttggaaggctgtggggata 260
Query: 61 tgggcagatggacgaatgagaacactgggctctgtgcccctatagttcttctccactgtg 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 tgggcagatggacgaatgagaacactgggctatgtgcccctatagttcttctccactgtg 320
Query: 121 gctgtcattgtgacacctcttccactctgtcccctcactcactctcagatatgtgtcggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctgtcattgtgacacctcttccactctgtcccctcactcactctcagatatgtgtcggt 380
Query: 181 gaacgtgagtttg 193
|||||||||||||
Sbjct: 381 gaacgtgagtttg 393
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
