Query= MSMg01no178_b09.b1 MSMg01no178_b09.b1 CHROMAT_FILE:
MSMg01no178_b09.b1 PHD_FILE: MSMg01no178_b09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:47 2005
(554 letters)
>mm_chr13_76185402_76186355
Length = 954
Score = 1025 bits (530), Expect = 0.0
Identities = 545/554 (98%), Gaps = 8/554 (1%)
Strand = Plus / Plus
Query: 5 gaattcaaattccttcgtctaaaaaatgacagatggccaagataacagaatgcttcaatg 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaattccttggtctaaaaaatgacagatggccaagataacagaatgcttcaatg 264
Query: 65 ctattaacttataaatagttccaggagtagtaattgggttgcatagatatatattaaaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctattaacttataaatagttccaggagtagtaattgggttgcatagatatatattaaaat 324
Query: 125 ttgagatctagttaaaattagaggaaactacttaattataagcctctgtatggtttggtc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgagatctagttaaaattagaggaaactacttaattataagcctctgtatggtttggtc 384
Query: 185 ttaactaaatcttctataaaatttaagtaacagtttaataggtcttcaaattaatttctt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttaactaaatcttctataaaatttaagtaacagtttaataggtcttcaaattaatttctt 444
Query: 245 tagttggtaatatatagttctatccttgttggagaatttcaaaatttatagctggcaatc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tagttggtaatatatagttctatccttgttggagaatttcaaaatttatagctggcaatc 504
Query: 305 agttgaaagatcattgtggaattgtgaggctcaccctttttaagacttttatagtttatt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agttgaaagatcattgtggaattgtgaggctcaccctttttaagacttttatagtttatt 564
Query: 365 taaaaacccc----aaccttgtctttctaaaacacgtttcctcttctttgctgcagaaac 420
|||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 taaaaa----gtttaaccttgtctttctaaaacacgtttcctcttctttgctgcagaaac 620
Query: 421 tattttttcctccctttgttccatccactgttctttgtcccatgcaaataatggtcgctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tattttttcctccctttgttccatccactgttctttgtcccatgcaaataatggtcgctc 680
Query: 481 tgtttcccttgcaattacaggtatagctatagagacactgaaagtgttatgcagcgaaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgtttcccttgcaattacaggtatagctatagagacactgaaagtgttatgcagcgaaag 740
Query: 541 agtgtctcagggat 554
||||||||||||||
Sbjct: 741 agtgtctcagggat 754
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 954
Length adjustment: 10
Effective length of query: 544
Effective length of database: 944
Effective search space: 513536
Effective search space used: 513536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no178_b09.g1 MSMg01no178_b09.g1 CHROMAT_FILE:
MSMg01no178_b09.g1 PHD_FILE: MSMg01no178_b09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:47 2005
(283 letters)
>mm_chr13_76333638_76334320
Length = 683
Score = 538 bits (278), Expect = e-157
Identities = 281/282 (99%)
Strand = Plus / Minus
Query: 1 aagggatgttgagtgctacaaacccaaatgtaatcctgtgtcacaaccaccattcctgtg 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 482 aagggatgttgagtgctacaaacccaaatgtaatcctgtgtcacaatcaccattcctgtg 423
Query: 61 gttttgggtttgttctgtaattttggttttctcatcttcaaatgggacaatgctgcacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gttttgggtttgttctgtaattttggttttctcatcttcaaatgggacaatgctgcacct 363
Query: 121 gccttgaaggttactgaaatatgagaaagaacatttattaaggtattgccaggtatcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gccttgaaggttactgaaatatgagaaagaacatttattaaggtattgccaggtatcaag 303
Query: 181 aactgctcaaggaagtctaaatggattcatacttgatactaatcacaacagagagatgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aactgctcaaggaagtctaaatggattcatacttgatactaatcacaacagagagatgaa 243
Query: 241 gcgacttactaggtcaggttactagatggagccagaacttga 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gcgacttactaggtcaggttactagatggagccagaacttga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
