Query= MSMg01no178_k04.b1 MSMg01no178_k04.b1 CHROMAT_FILE:
MSMg01no178_k04.b1 PHD_FILE: MSMg01no178_k04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:28 2005
(225 letters)
>mm_chr13_96671812_96672436
Length = 625
Score = 398 bits (206), Expect = e-115
Identities = 215/220 (97%), Gaps = 4/220 (1%)
Strand = Plus / Plus
Query: 10 gaaagaaattaaacaaaataaagttagtaatttattagcaaactataatgtcttgagtta 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gaaagaaattaaacaaaataaagttagtaatttattagcaaactataatgtcttgagtta 269
Query: 70 gaggcaatagtgcagcctgtgcccagtgcactgagggctctagctttgattcttaggaac 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gaggcaatagtgcagcctgtgcccagtgcactgagggctctagctttgattcttaggaac 329
Query: 130 tctctctctctctctctctctctctctctctctctctctctctctctctctctctctctc 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tctctctctctctctctctctctctctctctctctctctctctctctctctctctctctc 389
Query: 190 t----ttctctctctctctctctctcctccttttcctctt 225
| ||||||||||||||||||||||||| |||||||||
Sbjct: 390 tctctttctctctctctctctctctcctccctttcctctt 429
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 144
Number of extensions: 37
Number of successful extensions: 37
Number of sequences better than 10.0: 1
Number of HSP's gapped: 31
Number of HSP's successfully gapped: 1
Length of query: 225
Length of database: 625
Length adjustment: 9
Effective length of query: 216
Effective length of database: 616
Effective search space: 133056
Effective search space used: 133056
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no178_k04.g1 MSMg01no178_k04.g1 CHROMAT_FILE:
MSMg01no178_k04.g1 PHD_FILE: MSMg01no178_k04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:29 2005
(200 letters)
>mm_chr13_96822705_96823305
Length = 601
Score = 333 bits (172), Expect = 5e-96
Identities = 194/204 (95%), Gaps = 7/204 (3%)
Strand = Plus / Minus
Query: 1 taaagtcacccattagtaatagatgaccaaaatgtttaaaaccacttttaaaaaccaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 taaagtcacccattagtaatagatgaccaaaatgtttaaaaccacttttaaaaaccaatg 342
Query: 61 ggaagttag--tatgagggaaaaaaaa--ctgtagctcatttcctagagtgttctgtttt 116
||||||||| ||||| |||||||| || ||||||||||||||||||||||||||||
Sbjct: 341 ggaagttagtatatga---aaaaaaaagcctttagctcatttcctagagtgttctgtttt 285
Query: 117 gtttaaatgtggtttaaactgatgttaggagaaaggatgcgaccccccttcagggactgt 176
|| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 284 gtgtaaatgtggtttaaactgatgttaggagaaaggatgtgaccccccttcagggactgt 225
Query: 177 cagaaggaatcaaaagtagcctag 200
||||||||||||||||||||||||
Sbjct: 224 cagaaggaatcaaaagtagcctag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 200
Length of database: 601
Length adjustment: 8
Effective length of query: 192
Effective length of database: 593
Effective search space: 113856
Effective search space used: 113856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
