CAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCACCTGAGCAATACCAAATGGCAGAGAAGCACCTGAAAAAATGT
TCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATT
CCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCA
GATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCTTCCATTGTTGGTGG
GATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAG
GAAATTGGACATAGTACTACCAGAGGATCCAGCAATACCTCTCCTGGGCA
TATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCACTATG
TTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATG
CCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGG
AGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGTCAAA
TGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAG
GAACTCACACAATATGCACTCACTGATAAGTGTATATCAGTCCAAAACCT
AGGATACTCAAGATATAAGATACCATTTCCTAAACACATGAAACTCAAGA
AACATGAAGACTGATGTGTGGACAC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTACACACTAGAATTACCAATCTCC
CGTTCTCTTCAGGCCGCCGTTGCTGGAAGGAGAGAGATAGTCAAAGGGAG
GGAAGGCAATCCAGTCAAGGCATAGATTTCTATTTTCAGGAAATCTCTAC
CACTTTAAGCAATAGTCAATAAACTTAGAGGAAGGGACCAAGAAGCAGCT
TACCACGTAGGCACGGGCACCCATCATTAGCACTAGCACATTCACAGCGG
CCACAGCCAGGCTGTGTGAGACAACTGCTCTTGTATTTGGTCTTTGTTGC
AGAGGCGTTATGGCAAGCTGTGTGAGTGCATAGACTCCCACGACATCTAT
GCTCTCTAGGTTTATGAACCAAGGAACTCGGACACAGAAGTGGGCAAAAG
GAAATGAGACAGTAAAATATAAACCTTACTTAAAATTGTGAATTGCATTT
GTTTTTCTATGTGTGTCTGTGTGCAAAGACCTGTGGAGACTTCTGATAAC
TTGTGGGAGTCTGTTCTCTCCTTCAAACCTGGTCCAGGGATCAAACCTAA
GTCATCAGGTTTGGCTGCAAGCACCTTTACTCACTATGCCATCTAGGCAG
CCCCTCAAAGACTCTCTTAAAGCTAGTTGATAACTAATTTTCAGATCAAT
TTAAGACAGAACTCATATAGGGACGAC

Query= MSMg01no179_o01.g1 MSMg01no179_o01.g1 CHROMAT_FILE:
MSMg01no179_o01.g1 PHD_FILE: MSMg01no179_o01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:00 2005
         (582 letters)



>mm_chr13_108934052_108935033
          Length = 982

 Score = 1081 bits (559), Expect = 0.0
 Identities = 578/585 (98%), Gaps = 5/585 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tacacactagaattaccaatctcccgttctcttcaggccgccgttgctggaaggagagag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tacacactagaattaccaatctcccgttctcttcaggccgccgttgctggaaggagagag 260

                                                                       
Query: 61  atagtcaaagggagggaaggcaatccagtcaaggcatagatttctattttcaggaaatct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atagtcaaagggagggaaggcaatccagtcaaggcatagatttctattttcaggaaatct 320

                                                                       
Query: 121 ctaccactttaagcaatagtcaataaacttagaggaagggaccaagaagcagcttaccac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctaccactttaagcaatagtcaataaacttagaggaagggaccaagaagcagcttaccac 380

                                                                       
Query: 181 gtaggcacgggcacccatcattagcactagcacattcacagcggccacagccaggctgtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaggcacgggcacccatcattagcactagcacattcacagcggccacagccaggctgtg 440

                                                                       
Query: 241 tgagacaactgctcttgtatttggtctttgttgcagaggcgtta-tggcaagctgtgtga 299
           |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 441 tgagacaactgctcttgtatttggtctttgttgcagaggcgttactg-caagctgtgtga 499

                                                                       
Query: 300 gtgcatagactcccacgacatctatgctctctaggtttatgaaccaaggaactcggacac 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtgcatagactcccacgacatctatgctctctaggtttatgaaccaaggaactcggacac 559

                                                                       
Query: 360 agaagtgggcaaaaggaaatgagacagtaaaatataaaccttacttaaaattgtgaattg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agaagtgggcaaaaggaaatgagacagtaaaatataaaccttacttaaaattgtgaattg 619

                                                                       
Query: 420 catttgtttttctatgtgtgtctgtgtgcaaa--gacctgtggagacttctgataacttg 477
           |||||||||||||||| |||||||||||||||  |||||||||||||||||||||| |||
Sbjct: 620 catttgtttttctatgcgtgtctgtgtgcaaaaagacctgtggagacttctgataa-ttg 678

                                                                       
Query: 478 tgggagtctgttctctccttcaaacctggtccagggatcaaacctaagtcatcaggtttg 537
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 679 tgggagtctgttctctccttcaaacctgttccagggatcaaacctaagtcatcaggtttg 738

                                                        
Query: 538 gctgcaagcacctttactcactatgccatctaggcagcccctcaa 582
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gctgcaagcacctttactcactatgccatctaggcagcccctcaa 783


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space:   555984
Effective search space used:   555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)